RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TJP1Q07157 1748 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TTLL1O95922 423 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TRIM49P0CI25 452 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TRIM49CP0CI26 452 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 LRRC14Q15048 493 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 KIRREL3Q8IZU9 778 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 FAM114A2Q9NRY5 505 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 RSPH10B2B2RC85 870 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 NR3C1P04150 777 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 RSPH10BP0C881 870 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 RAPGEF5Q92565 580 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 CFBP00751 764 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 BIRC3Q13489 604 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 KNOP1Q1ED39 458 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 SEL1L2Q5TEA6 688 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 SPICE1Q8N0Z3 855 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 DHX36Q9H2U1 1008 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC188H7C350 402 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 NOL4O94818 638 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 ZNF844Q08AG5 666 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 CETN1Q12798 172 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 NEDD9Q14511 834 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 SUGP1Q8IWZ8 645 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 NSRP1Q9H0G5 558 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
TMEM200A-201ENST00000296978 DCDC2CA8MYV0 355 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CYP11B2P19099 503 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CASP5P51878 434 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PSMC6P62333 389 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CNPY4Q8N129 248 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 TPCN2Q8NHX9 752 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 NEK9Q8TD19 979 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 MTMR9Q96QG7 549 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PCIF1Q9H4Z3 704 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 JMJD4Q9H9V9 463 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 M0R2N6 131 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 SNX1Q13596 522 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PHLDB2Q86SQ0 1253 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 USP21Q9UK80 565 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CHD4Q14839 1912 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 EVI5O60447 810 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 MED24O75448 989 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 ACSL3O95573 720 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 FERP16591 822 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 C16orf86Q6ZW13 317 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 SLC35G2Q8TBE7 412 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 VEZTQ9HBM0 779 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
TMEM200A-201ENST00000296978 CAND2O75155 1236 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 FGFR4P22455 802 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 HSPA9P38646 679 aaKnown RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 TRIP13Q15645 432 aaPredicted RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 QPCTQ16769 361 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 UBL4BQ8N7F7 174 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 THOC1Q96FV9 657 aaKnown RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 ACTR5Q9H9F9 607 aaPredicted RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 TBK1Q9UHD2 729 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 KCNG1Q9UIX4 513 aa13.64□□□□□ -0.23
TMEM200A-201ENST00000296978 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms