RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 INPP1P49441 399 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 GUF1Q8N442 669 aaKnown RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 TRIM15Q9C019 465 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 USP6P35125 1406 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 IL6STP40189 918 aaPredicted RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 ABCB5Q2M3G0 1257 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 DEPDC1BQ8WUY9 529 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 CFAP36Q96G28 342 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 SUFUQ9UMX1 484 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 ARL2BPQ9Y2Y0 163 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 AGTP01019 485 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 PYGBP11216 843 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ARFIP2P53365 341 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 KCNB1Q14721 858 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 DTNBP1Q96EV8 351 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 HSPA9P38646 679 aaKnown RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ARL4AP40617 200 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ANO5Q75V66 913 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 DNAAF3Q8N9W5 541 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 NACA2Q9H009 215 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ZBTB22O15209 634 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 METTL13Q8N6R0 699 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 KANSL2Q9H9L4 492 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 L2HGDHQ9H9P8 463 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 LY9Q9HBG7 655 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 CNOT8Q9UFF9 292 aaKnown RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 CCPG1Q9ULG6 757 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 IVNS1ABPQ9Y6Y0 642 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 KRT10P13645 584 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ALX1Q15699 326 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 GRAMD4Q6IC98 578 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 CYB5R4Q7L1T6 521 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 SPATA21Q7Z572 469 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
PBRM1-201ENST00000296302 RAD54LQ92698 747 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ANAPC7Q9UJX3 599 aa11.82□□□□□ -0.52
PBRM1-201ENST00000296302 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 PRPSAP2O60256 369 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 ZBED1O96006 694 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 USP17L2Q6R6M4 530 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 MCUQ8NE86 351 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 DACT3Q96B18 629 aaPredicted RBP11.81□□□□□ -0.52
PBRM1-201ENST00000296302 NUB1Q9Y5A7 615 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 PFASO15067 1338 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 HSPA4LO95757 839 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 IRAK1P51617 712 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 ITKQ08881 620 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 TFDP1Q14186 410 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 FAM160B1Q5W0V3 765 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 NEDD4P46934 1319 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 FOXP2O15409 715 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 NR3C1P04150 777 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 MCAMP43121 646 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 IFRD2Q12894 506 aaPredicted RBP11.81□□□□□ -0.52
PBRM1-201ENST00000296302 AGBL2Q5U5Z8 902 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 HIPK4Q8NE63 616 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 SUGCTQ9HAC7 445 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 STXBP3O00186 592 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 MCF2P10911 925 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 BIRC2Q13490 618 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 NR1I3Q14994 352 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 TC2NQ8N9U0 490 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 XDHP47989 1333 aa11.81□□□□□ -0.52
PBRM1-201ENST00000296302 PSMD14O00487 310 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 FOXN1O15353 648 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 OCA2Q04671 838 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 KCTD1Q719H9 257 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
PBRM1-201ENST00000296302 CCNYQ8ND76 341 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms