RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZNF571Q7Z3V5 609 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 FRMD5Q7Z6J6 570 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 VCPKMTQ9H867 229 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 CALCOCO1Q9P1Z2 691 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 SAMM50Q9Y512 469 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 PSMD10O75832 226 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 ODR4Q5SWX8 454 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 FOXR2Q6PJQ5 311 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 ZNF341Q9BYN7 854 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 LUC7LQ9NQ29 371 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.369e-29■■■■■ 531
NCKIPSD-201ENST00000294129 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 TMCO5BA8MYB1 307 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 PIK3CDO00329 1044 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 PJA2O43164 708 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 CYP3A4P08684 503 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 TRIM49P0CI25 452 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 TRIM49CP0CI26 452 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 RPL13P26373 211 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 RXRBP28702 533 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 PRELPP51888 382 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 RBM46Q8TBY0 533 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 PARVGQ9HBI0 331 aa17.31■□□□□ 0.36
NCKIPSD-201ENST00000294129 TGFB1I1O43294 461 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 TUBBP07437 444 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 HOXA7P31268 230 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 LXNQ9BS40 222 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 MRPL11Q9Y3B7 192 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 IPO5O00410 1097 aaKnown RBP17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 NFIBO00712 420 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 GFPT2O94808 682 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 INPP5BP32019 993 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 GBP6Q6ZN66 633 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 FAM186BQ8IYM0 893 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 SLC35C1Q96A29 364 aa17.3■□□□□ 0.36
NCKIPSD-201ENST00000294129 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 SYCP3Q8IZU3 236 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 ZSCAN5CA6NGD5 496 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 ALAS1P13196 640 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 MCM3P25205 808 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 NAB2Q15742 525 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 C8orf74Q6P047 294 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 C1orf186Q6ZWK4 172 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 RANBP17Q9H2T7 1088 aaKnown RBP17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 ACBD3Q9H3P7 528 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
NCKIPSD-201ENST00000294129 DPEP1P16444 411 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 ZC3H3Q8IXZ2 948 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TARSL2A2RTX5 802 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TMEM150BA6NC51 233 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TISP43B9A030 160 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 CAP2P40123 477 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 IRX5P78411 483 aaPredicted RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 EPHA7Q15375 998 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 SLC5A5Q92911 643 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 SEPT11Q9NVA2 429 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 COL20A1Q9P218 1284 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 SLC26A4O43511 780 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 RNF40O75150 1001 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 SKIDA1Q1XH10 827 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
NCKIPSD-201ENST00000294129 ZNF646O15015 1829 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 GRID2IPA4D2P6 1211 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 GGCXP38435 758 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 PPP2R5CQ13362 524 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 CFAP221Q4G0U5 840 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 ALKBH5Q6P6C2 394 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 HS2ST1Q7LGA3 356 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 RNF10Q8N5U6 811 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 IFT81Q8WYA0 676 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 FAM204AQ9H8W3 233 aa17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 PPP1R1BQ9UD71 204 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-201ENST00000294129 KCNK3O14649 394 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 CAPN2P17655 700 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 GAP43P17677 238 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 ITGB5P18084 799 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 ARHGAP44Q17R89 818 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms