RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 OATP04181 439 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 SSBP05455 408 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCDC78-201ENST00000293889 C6orf222P0C671 652 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-201ENST00000293889 NKX3-2P78367 333 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 BRDTQ58F21 947 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-201ENST00000293889 XKR3Q5GH77 459 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 CKAP2LQ8IYA6 745 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 SYT2Q8N9I0 419 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-201ENST00000293889 SPC25Q9HBM1 224 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 ANKEF1Q9NU02 776 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 DBR1Q9UK59 544 aaKnown RBP19.81■□□□□ 0.76
CCDC78-201ENST00000293889 OGDHLQ9ULD0 1010 aa19.81■□□□□ 0.76
CCDC78-201ENST00000293889 ADAMTS4O75173 837 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 PRR29P0C7W0 189 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 MARK3P27448 753 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 CASP1P29466 404 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 PNOCQ13519 176 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 POSTNQ15063 836 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 GNASQ5JWF2 1037 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 PLA2G4FQ68DD2 849 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 ERCC4Q92889 916 aaPredicted RBP19.8■□□□□ 0.76
CCDC78-201ENST00000293889 CCDC34Q96HJ3 373 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 SH2D3AQ9BRG2 576 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 MKI67P46013 3256 aaKnown RBP19.8■□□□□ 0.76
CCDC78-201ENST00000293889 TFRCP02786 760 aaKnown RBP19.8■□□□□ 0.76
CCDC78-201ENST00000293889 RARRES1P49788 294 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 SLC26A2P50443 739 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 PLCB4Q15147 1175 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 OTUD6AQ7L8S5 288 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 GPBP1Q86WP2 473 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 BLZF1Q9H2G9 400 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 ERAP1Q9NZ08 941 aa19.8■□□□□ 0.76
CCDC78-201ENST00000293889 SEPT9Q9UHD8 586 aaPredicted RBP19.8■□□□□ 0.76
CCDC78-201ENST00000293889 HOOK1Q9UJC3 728 aaKnown RBP19.8■□□□□ 0.76
CCDC78-201ENST00000293889 ARHGEF35A5YM69 484 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 MYMKA6NI61 221 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 H3BRB1 525 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 GTPBP6O43824 516 aaPredicted RBP19.79■□□□□ 0.76
CCDC78-201ENST00000293889 MYL3P08590 195 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 NPEPPSP55786 919 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 AMPD3Q01432 767 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 CUL4BQ13620 913 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 XKR9Q5GH70 373 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 FAM167AQ96KS9 214 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 RNPEPQ9H4A4 650 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 TUT1Q9H6E5 874 aaKnown RBP19.79■□□□□ 0.76
CCDC78-201ENST00000293889 NRBP2Q9NSY0 501 aa19.79■□□□□ 0.76
CCDC78-201ENST00000293889 CYP11B2P19099 503 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
CCDC78-201ENST00000293889 ARSHQ5FYA8 562 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 KLHDC9Q8NEP7 349 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 BBXQ8WY36 941 aaPredicted RBP19.78■□□□□ 0.76
CCDC78-201ENST00000293889 KAT2BQ92831 832 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 CEP170P1Q96L14 293 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 C7orf25Q9BPX7 421 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 RUSC1Q9BVN2 902 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 NIFKQ9BYG3 293 aaKnown RBP19.78■□□□□ 0.76
CCDC78-201ENST00000293889 TRIM9Q9C026 710 aa19.78■□□□□ 0.76
CCDC78-201ENST00000293889 ZNF215Q9UL58 517 aaPredicted RBP19.78■□□□□ 0.76
CCDC78-201ENST00000293889 SYCE3A1L190 88 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 LETM1O95202 739 aaPredicted RBP19.77■□□□□ 0.76
CCDC78-201ENST00000293889 F2P00734 622 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 DPYDQ12882 1025 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 RINT1Q6NUQ1 792 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 PADI6Q6TGC4 694 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 RBM43Q6ZSC3 357 aaKnown RBP19.77■□□□□ 0.76
CCDC78-201ENST00000293889 C1orf186Q6ZWK4 172 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 DDX12PQ92771 950 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 CCDC43Q96MW1 224 aaKnown RBP19.77■□□□□ 0.76
CCDC78-201ENST00000293889 LRRC27Q9C0I9 530 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 CYP26B1Q9NR63 512 aa19.77■□□□□ 0.76
CCDC78-201ENST00000293889 NPHP3-ACAD11A0A0J9YXS1 232 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 KPNA6O60684 536 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 MYCNP04198 464 aaPredicted RBP19.76■□□□□ 0.75
CCDC78-201ENST00000293889 MYL1P05976 194 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 CST5P28325 142 aaPredicted RBP19.76■□□□□ 0.75
CCDC78-201ENST00000293889 PURAQ00577 322 aaKnown RBP19.76■□□□□ 0.75
CCDC78-201ENST00000293889 LRRC41Q15345 812 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 UVSSAQ2YD98 709 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 MTERF2Q49AM1 385 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 DYMQ7RTS9 669 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 KIAA1468Q9P260 1216 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 TRPC6Q9Y210 931 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 PCDHA5Q9Y5H7 936 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 ZEB2O60315 1214 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 CAPN15O75808 1086 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 TARBP2Q15633 366 aaKnown RBP19.76■□□□□ 0.75
CCDC78-201ENST00000293889 KCNA10Q16322 511 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 CCSAPQ6IQ19 270 aaPredicted RBP19.76■□□□□ 0.75
CCDC78-201ENST00000293889 CNNM4Q6P4Q7 775 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
CCDC78-201ENST00000293889 LOXHD1Q8IVV2 1947 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 ZBTB42B2RXF5 422 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 HBP1O60381 514 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 RAD51AP2Q09MP3 1159 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 RNF180Q86T96 592 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 SPATA20Q8TB22 786 aa19.75■□□□□ 0.75
CCDC78-201ENST00000293889 DIS3LQ8TF46 1054 aaKnown RBP19.75■□□□□ 0.75
CCDC78-201ENST00000293889 SMARCE1Q969G3 411 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms