RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 BIRC3Q13489 604 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 PRR16Q569H4 304 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 KCNV1Q6PIU1 500 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 DAAM2Q86T65 1068 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 RASGEF1CQ8N431 466 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 UBLCP1Q8WVY7 318 aaPredicted RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 RBM17Q96I25 401 aaKnown RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 MXD3Q9BW11 206 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 GCNT4Q9P109 453 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 AJAP1Q9UKB5 411 aaPredicted RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 NR3C1P04150 777 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 RPL13P26373 211 aaKnown RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 JAM2P57087 298 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 MTMR3Q13615 1198 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 RNF187Q5TA31 235 aaPredicted RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 MOXD1Q6UVY6 613 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 ETNPPLQ8TBG4 499 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 SLITRK6Q9H5Y7 841 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 SIX2Q9NPC8 291 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
LSM12-201ENST00000293406 STXBP5LQ9Y2K9 1186 aa20.92■□□□□ 0.94
LSM12-201ENST00000293406 KIF13BQ9NQT8 1826 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 DAPK3O43293 454 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 ITGA4P13612 1032 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 RPA1P27694 616 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 CCDC26Q8TAB7 109 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 CERKQ8TCT0 537 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 CEP89Q96ST8 783 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 BCCIPQ9P287 314 aaKnown RBP eCLIP20.91■□□□□ 0.94
LSM12-201ENST00000293406 GGA2Q9UJY4 613 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 INTUQ9ULD6 942 aa20.91■□□□□ 0.94
LSM12-201ENST00000293406 DDX3XO00571 662 aaKnown RBP eCLIP20.9■□□□□ 0.941e-9■■■■■ 41.2
LSM12-201ENST00000293406 SLC16A3O15427 465 aaKnown RBP20.9■□□□□ 0.94
LSM12-201ENST00000293406 SPATA31C1P0DKV0 1188 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 CASP4P49662 377 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 ARHGAP4P98171 946 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 U2AF1L4Q8WU68 220 aaKnown RBP20.9■□□□□ 0.94
LSM12-201ENST00000293406 SLC35C1Q96A29 364 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 USP40Q9NVE5 1235 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 MYO1FO00160 1098 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 FLT3P36888 993 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 AP3B2Q13367 1082 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 ODF2Q5BJF6 829 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 GJB7Q6PEY0 223 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 NT5DC3Q86UY8 548 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 SLC12A6Q9UHW9 1150 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 ASTN1O14525 1302 aa20.9■□□□□ 0.94
LSM12-201ENST00000293406 TTI1O43156 1089 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 BBOX1O75936 387 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 GCNT3O95395 438 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 FERP16591 822 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 NPEPPSP55786 919 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 IFT88Q13099 833 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 BMT2Q1RMZ1 405 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 CYFIP2Q96F07 1278 aa20.89■□□□□ 0.94
LSM12-201ENST00000293406 RSPH10B2B2RC85 870 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 MEIS2O14770 477 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 HLA-DOAP06340 250 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 RSPH10BP0C881 870 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 MNAT1P51948 309 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 SWT1Q5T5J6 900 aaKnown RBP20.89■□□□□ 0.93
LSM12-201ENST00000293406 HES6Q96HZ4 224 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 PCDHB13Q9Y5F0 798 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 BTAF1O14981 1849 aa20.89■□□□□ 0.93
LSM12-201ENST00000293406 GMNCA6NCL1 334 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 TBX3O15119 743 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 CLIC2O15247 247 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 GFPT2O94808 682 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 AGBL2Q5U5Z8 902 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 TMC3Q7Z5M5 1100 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 CRYGNQ8WXF5 182 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 CABS1Q96KC9 395 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 AMFRQ9UKV5 643 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 UTP11Q9Y3A2 253 aaKnown RBP20.88■□□□□ 0.93
LSM12-201ENST00000293406 GTPBP10A4D1E9 387 aaKnown RBP20.88■□□□□ 0.93
LSM12-201ENST00000293406 TBCAO75347 108 aaKnown RBP20.88■□□□□ 0.93
LSM12-201ENST00000293406 STAT1P42224 750 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 GALCP54803 685 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 PPARDQ03181 441 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 KCTD19Q17RG1 926 aaPredicted RBP20.88■□□□□ 0.93
LSM12-201ENST00000293406 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
LSM12-201ENST00000293406 PPP2R2AP63151 447 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 Q4G0T1 1027 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 SEC14L1Q92503 715 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 CELF4Q9BZC1 486 aaKnown RBP20.87■□□□□ 0.93
LSM12-201ENST00000293406 BHMT2Q9H2M3 363 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 FAM114A2Q9NRY5 505 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 SUGT1Q9Y2Z0 365 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 TRAPPC3O43617 180 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 EVI5O60447 810 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 TMOD1P28289 359 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 CYP4A11Q02928 519 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 C6orf89Q6UWU4 347 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 C3orf20Q8ND61 904 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 P2RX7Q99572 595 aaKnown RBP20.87■□□□□ 0.93
LSM12-201ENST00000293406 DPH5Q9H2P9 285 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 YY1AP1Q9H869 796 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 NOVA2Q9UNW9 492 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms