RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 ZNF720Q7Z2F6 126 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 SMAP1Q8IYB5 467 aaPredicted RBP11.21□□□□□ -0.61
C9orf43-201ENST00000288462 DNERQ8NFT8 737 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 CHP1Q99653 195 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
C9orf43-201ENST00000288462 EDEM3Q9BZQ6 932 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 L2HGDHQ9H9P8 463 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 POLD4Q9HCU8 107 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 FBXO40Q9UH90 709 aa11.21□□□□□ -0.61
C9orf43-201ENST00000288462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.21□□□□□ -0.61
C9orf43-201ENST00000288462 GLTPD2A6NH11 291 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 EPHB6O15197 1021 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 MAPTP10636 758 aaKnown RBP11.21□□□□□ -0.62
C9orf43-201ENST00000288462 RPL13P26373 211 aaKnown RBP11.21□□□□□ -0.62
C9orf43-201ENST00000288462 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 KCNA1Q09470 495 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 KCNMA1Q12791 1236 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 MOGSQ13724 837 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 MOB2Q70IA6 237 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.62
C9orf43-201ENST00000288462 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.62
C9orf43-201ENST00000288462 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 AGTPBP1Q9UPW5 1226 aa11.21□□□□□ -0.62
C9orf43-201ENST00000288462 SPATA31C2B4DYI2 1134 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 CNMDO75829 334 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 NDUFA10O95299 355 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ICAM3P32942 547 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ALCAMQ13740 583 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ZC2HC1CQ53FD0 456 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ODR4Q5SWX8 454 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ZNF397Q8NF99 534 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 SPATC1LQ9H0A9 340 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 FAM207AQ9NSI2 230 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 REXO2Q9Y3B8 237 aaKnown RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 PCDHA10Q9Y5I2 948 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 BACH1O14867 736 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 AKAP3O75969 853 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ERCC3P19447 782 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 HERVK_113P62684 666 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 BAP1Q92560 729 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 METTL14Q9HCE5 456 aaKnown RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 ARMCX3Q9UH62 379 aaPredicted RBP11.2□□□□□ -0.62
C9orf43-201ENST00000288462 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
C9orf43-201ENST00000288462 MYH9P35579 1960 aaKnown RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 A0A0U1RQJ8 604 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 IQCA1LA6NCM1 817 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 PEX10O60683 326 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 PLS3P13797 630 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 EDNRBP24530 442 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 CCDC170Q8IYT3 715 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ANKRD35Q8N283 1001 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 GOLGA5Q8TBA6 731 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 MKNK1Q9BUB5 465 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ST6GALNAC4Q9H4F1 302 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ZNHIT6Q9NWK9 470 aaKnown RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 CEP72Q9P209 647 aa11.19□□□□□ -0.62
C9orf43-201ENST00000288462 LARSQ9P2J5 1176 aaKnown RBP11.19□□□□□ -0.62
C9orf43-201ENST00000288462 TMEM150BA6NC51 233 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 DKC1O60832 514 aaKnown RBP eCLIP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 NOL4O94818 638 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 STBD1O95210 358 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ARHGAP25P42331 645 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 CNTN2Q02246 1040 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 STXBP2Q15833 593 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 PDXDC1Q6P996 788 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 TMEM174Q8WUU8 243 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 ATP6V0A1Q93050 837 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
C9orf43-201ENST00000288462 WDR24Q96S15 920 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 AGPAT3Q9NRZ7 376 aa11.18□□□□□ -0.62
C9orf43-201ENST00000288462 DMAC2Q9NW81 257 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms