RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TMEM106CQ9BVX2 250 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 DACT1Q9NYF0 836 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 SERTAD1Q9UHV2 236 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 MBD3O95983 291 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 TFRCP02786 760 aaKnown RBP19.19■□□□□ 0.66
SKP2-201ENST00000274254 PLA2G4BP0C869 781 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 CAPN2P17655 700 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 MCM6Q14566 821 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 KRBA2Q6ZNG9 492 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 TIGD1Q96MW7 591 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 MTRQ99707 1265 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 MAGEF1Q9HAY2 307 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 CYP26B1Q9NR63 512 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 TRPC6Q9Y210 931 aa19.19■□□□□ 0.66
SKP2-201ENST00000274254 ARID2Q68CP9 1835 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 A0A1W2PQ45 241 aaPredicted RBP19.18■□□□□ 0.66
SKP2-201ENST00000274254 A0A1W2PQY0 241 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 NPEPPSP55786 919 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 XKR9Q5GH70 373 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 CEP170P1Q96L14 293 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 GLT1D1Q96MS3 346 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 SH2D3AQ9BRG2 576 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 PPME1Q9Y570 386 aa19.18■□□□□ 0.66
SKP2-201ENST00000274254 COL1A2P08123 1366 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 KAT6AQ92794 2004 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 GRIN2DO15399 1336 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 KINO60870 393 aaKnown RBP19.17■□□□□ 0.66
SKP2-201ENST00000274254 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 INSRRP14616 1297 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 HOXC8P31273 242 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 COL13A1Q5TAT6 717 aaPredicted RBP19.17■□□□□ 0.66
SKP2-201ENST00000274254 SESTD1Q86VW0 696 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 ANKLE1Q8NAG6 615 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
SKP2-201ENST00000274254 NRCAMQ92823 1304 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 PPFIA1Q13136 1202 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 NBPF20Q3BBV1 942 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 MTERF2Q49AM1 385 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 ZNF484Q5JVG2 852 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 SV2BQ7L1I2 683 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 SH3RF1Q7Z6J0 888 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 ELOA2Q8IYF1 753 aaPredicted RBP19.16■□□□□ 0.66
SKP2-201ENST00000274254 PAGE5Q96GU1 130 aa19.16■□□□□ 0.66
SKP2-201ENST00000274254 SSBP05455 408 aaKnown RBP eCLIP19.15■□□□□ 0.66
SKP2-201ENST00000274254 CYP11B2P19099 503 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 ADAM17P78536 824 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 GRIK4Q16099 956 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 RINT1Q6NUQ1 792 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 PADI6Q6TGC4 694 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 C1orf186Q6ZWK4 172 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 CCDC43Q96MW1 224 aaKnown RBP19.15■□□□□ 0.66
SKP2-201ENST00000274254 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 DHX33Q9H6R0 707 aaKnown RBP19.15■□□□□ 0.66
SKP2-201ENST00000274254 KCND2Q9NZV8 630 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 HDAC6Q9UBN7 1215 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 RRN3P2A6NIE6 340 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 COL6A1P12109 1028 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 CHMP4BP1P59074 171 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 ITGA7Q13683 1181 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 HIC1Q14526 733 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 DHX8Q14562 1220 aaKnown RBP19.15■□□□□ 0.66
SKP2-201ENST00000274254 ARSHQ5FYA8 562 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 MARCH8Q5T0T0 291 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 KANK3Q6NY19 840 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 C7orf31Q8N865 590 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 SLC43A3Q8NBI5 491 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 PPP1R13LQ8WUF5 828 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 TRAPPC12Q8WVT3 735 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 STAMQ92783 540 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 STARD7Q9NQZ5 370 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 PDLIM7Q9NR12 457 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 SETD4Q9NVD3 440 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
SKP2-201ENST00000274254 MYMKA6NI61 221 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 DGAT1O75907 488 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 RFC5P40937 340 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 MDM2Q00987 491 aaPredicted RBP19.14■□□□□ 0.65
SKP2-201ENST00000274254 AMPD3Q01432 767 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 KLHL40Q2TBA0 621 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 CNNM4Q6P4Q7 775 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 GPBP1Q86WP2 473 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 GRAMD1CQ8IYS0 662 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 VTI1AQ96AJ9 217 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.65
SKP2-201ENST00000274254 IGKV6-21A0A0C4DH24 114 aa19.13■□□□□ 0.65
SKP2-201ENST00000274254 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
SKP2-201ENST00000274254 MBLAC1A4D2B0 266 aaPredicted RBP19.13■□□□□ 0.65
SKP2-201ENST00000274254 USO1O60763 962 aaKnown RBP19.13■□□□□ 0.65
SKP2-201ENST00000274254 MAFO75444 373 aaPredicted RBP19.13■□□□□ 0.65
SKP2-201ENST00000274254 C22orf31O95567 290 aa19.13■□□□□ 0.65
SKP2-201ENST00000274254 GUCY2CP25092 1073 aa19.13■□□□□ 0.65
SKP2-201ENST00000274254 AFMP43652 599 aa19.13■□□□□ 0.65
SKP2-201ENST00000274254 IGBP1P78318 339 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms