RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RAB17Q9H0T7 212 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 THAP9Q9H5L6 903 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 hCG_2014768A0A024R1R8 64 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 TPBGLP0DKB5 382 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 FUT4P22083 530 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 GSTT1P30711 240 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 SLC1A4P43007 532 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 GFPT1Q06210 699 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 MPP3Q13368 585 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 DYNC1I2Q13409 638 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 WTAPQ15007 396 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 PTPROQ16827 1216 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 LRRC45Q96CN5 670 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.32
CTDSP1-201ENST00000273062 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 F8VZ95 297 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 RFC4P35249 363 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 FAM47EQ6ZV65 393 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 ARMCX6Q7L4S7 300 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 TMC3Q7Z5M5 1100 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 CCDC155Q8N6L0 562 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 CENPTQ96BT3 561 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 PALMO75781 387 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 CALB2P22676 271 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 PTDSS1P48651 473 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 IFI35P80217 286 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 NFIXQ14938 502 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 CACNA2D4Q7Z3S7 1137 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 FBF1Q8TES7 1133 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 MYH1P12882 1939 aa17.07■□□□□ 0.32
CTDSP1-201ENST00000273062 DAPK3O43293 454 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 CD151P48509 253 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 SERPINB4P48594 390 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 ZNF131P52739 623 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 UBAP2Q5T6F2 1119 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 DTNBP1Q96EV8 351 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 ATXN10Q9UBB4 475 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 AKR1B10O60218 316 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 OAS1P00973 400 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 MAGEA1P43355 309 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 EHHADHQ08426 723 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 AP1M1Q9BXS5 423 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 FGFR1OP2Q9NVK5 253 aa17.06■□□□□ 0.32
CTDSP1-201ENST00000273062 TNKSO95271 1327 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 PSMC4P43686 418 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 USP38Q8NB14 1042 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 DNAJC9Q8WXX5 260 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 H7C1D1 291 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 ZNF189O75820 626 aaPredicted RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 CYP2D6P10635 497 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 EIF4BP23588 611 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 DNM2P50570 870 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 USP46P62068 366 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 RTN1Q16799 776 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 ZNF658Q5TYW1 1059 aaPredicted RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 ARL10Q8N8L6 244 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 ANKRD27Q96NW4 1050 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 GOLPH3Q9H4A6 298 aa17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
CTDSP1-201ENST00000273062 GNA14O95837 355 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 CYP1A1P04798 512 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 ETS2P15036 469 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 ACADSP16219 412 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 MMP13P45452 471 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 LRRC14Q15048 493 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 ZNF654Q8IZM8 581 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 TTC8Q8TAM2 541 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 STK32AQ8WU08 396 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 DDX47Q9H0S4 455 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 ATP8A1Q9Y2Q0 1164 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 TLDC2A0PJX2 215 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 USP17L21D6R901 530 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 NMT2O60551 498 aa17.04■□□□□ 0.32
CTDSP1-201ENST00000273062 MCL1Q07820 350 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms