RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CIITAP33076 1130 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 QRICH1Q2TAL8 776 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 EFCAB13Q8IY85 973 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 MFSD14CQ5VZR4 134 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 ZNF449Q6P9G9 518 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 ZNF34Q8IZ26 560 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 OTUD5Q96G74 571 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 FAN1Q9Y2M0 1017 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
SMG9-201ENST00000270066 HEXIM1O94992 359 aaKnown RBP14.31□□□□□ -0.12
SMG9-201ENST00000270066 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 RABGGTAQ92696 567 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 RAB3IPQ96QF0 476 aaPredicted RBP14.31□□□□□ -0.12
SMG9-201ENST00000270066 NUF2Q9BZD4 464 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 POTEMA6NI47 508 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 CPP00450 1065 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMG9-201ENST00000270066 SLC8A2Q9UPR5 921 aa14.31□□□□□ -0.12
SMG9-201ENST00000270066 ASB14A6NK59 587 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 PDE1BQ01064 536 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 NFX1Q12986 1120 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 NXNQ6DKJ4 435 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 DARS2Q6PI48 645 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 RAB44Q7Z6P3 723 aaPredicted RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 ERICH1Q86X53 443 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 THNSL1Q8IYQ7 743 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 XXYLT1Q8NBI6 393 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 PSPC1Q8WXF1 523 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 MED4Q9NPJ6 270 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 SEL1LQ9UBV2 794 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 RPSAP08865 295 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 SAT1P21673 171 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 USP11P51784 963 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 CLCN6P51797 869 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 KRT31Q15323 416 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 FBXO38Q6PIJ6 1188 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 KCNV1Q6PIU1 500 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 RHOT2Q8IXI1 618 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 SKA2Q8WVK7 121 aaPredicted RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 CALR3Q96L12 384 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 ZC3H13Q5T200 1668 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 BZW1Q7L1Q6 419 aaKnown RBP14.3□□□□□ -0.12
SMG9-201ENST00000270066 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
SMG9-201ENST00000270066 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 STAT3P40763 770 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 C12orf60Q5U649 245 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 PRR5LQ6MZQ0 368 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 NSUN4Q96CB9 384 aaKnown RBP14.29□□□□□ -0.12
SMG9-201ENST00000270066 CALN1Q9BXU9 219 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 PSMC5P62195 406 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 BEST2Q8NFU1 509 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.29□□□□□ -0.124e-9■■■□□ 17.4
SMG9-201ENST00000270066 NR3C1P04150 777 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 PSMD6Q15008 389 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 ZNF568Q3ZCX4 644 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 PHLDB2Q86SQ0 1253 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 ANKRD65E5RJM6 399 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 ENC1O14682 589 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 CHRNA5P30532 468 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 ASPHQ12797 758 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 TERF2Q15554 542 aa14.29□□□□□ -0.12
SMG9-201ENST00000270066 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
SMG9-201ENST00000270066 NDUFA10O95299 355 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 MOCS3O95396 460 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 CLTAP09496 248 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 AKR1B1P15121 316 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 DNAAF3Q8N9W5 541 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 URGCPQ8TCY9 931 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 TMEM260Q9NX78 707 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 DIP2AQ14689 1571 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 MYO3AQ8NEV4 1616 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 GOLGA8QA0A0J9YX86 632 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 GOLGA8OA6NCC3 632 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 GOLGA8NF8WBI6 632 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 GPC3P51654 580 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 KPNA2P52292 529 aaKnown RBP14.28□□□□□ -0.12
SMG9-201ENST00000270066 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 RNF10Q8N5U6 811 aaKnown RBP14.28□□□□□ -0.12
SMG9-201ENST00000270066 LRRC8CQ8TDW0 803 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
SMG9-201ENST00000270066 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
SMG9-201ENST00000270066 EPHB4P54760 987 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms