RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SMC2O95347 1197 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 PRR29P0C7W0 189 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 CDC25AP30304 524 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 TECP42680 631 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 TXKP42681 527 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 GDF6Q6KF10 455 aaPredicted RBP27.47■■□□□ 1.99
SSBP4-201ENST00000270061 GPR20Q99678 358 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.47■■□□□ 1.992e-8■□□□□ 9.9
SSBP4-201ENST00000270061 HDAC6Q9UBN7 1215 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 GTF2IRD1Q9UHL9 959 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 TANC1Q9C0D5 1861 aa27.47■■□□□ 1.99
SSBP4-201ENST00000270061 A0A087WWV3 80 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 ATP9AO75110 1047 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 KCNA2P16389 499 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 SP4Q02446 784 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 KARSQ15046 597 aaKnown RBP27.46■■□□□ 1.99
SSBP4-201ENST00000270061 Q4G0T1 1027 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 CABP7Q86V35 215 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 HAS1Q92839 578 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 IL23AQ9NPF7 189 aa27.46■■□□□ 1.99
SSBP4-201ENST00000270061 PP2D1A8MPX8 630 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 H3BRB1 525 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 LGALS2P05162 132 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 ACRP10323 421 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 RRAGBQ5VZM2 374 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 PSRC1Q6PGN9 363 aaPredicted RBP27.45■■□□□ 1.99
SSBP4-201ENST00000270061 C16orf59Q7L2K0 433 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 GRAMD1CQ8IYS0 662 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 MXRA8Q9BRK3 442 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 CUEDC2Q9H467 287 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 TUT1Q9H6E5 874 aaKnown RBP27.45■■□□□ 1.99
SSBP4-201ENST00000270061 KCNMB3Q9NPA1 279 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 MAN1B1Q9UKM7 699 aa27.45■■□□□ 1.99
SSBP4-201ENST00000270061 STAT6P42226 847 aa27.45■■□□□ 1.98
SSBP4-201ENST00000270061 DPYDQ12882 1025 aa27.45■■□□□ 1.98
SSBP4-201ENST00000270061 TMEM240Q5SV17 173 aa27.45■■□□□ 1.98
SSBP4-201ENST00000270061 DHX40Q8IX18 779 aaKnown RBP27.45■■□□□ 1.98
SSBP4-201ENST00000270061 MAGEF1Q9HAY2 307 aa27.45■■□□□ 1.98
SSBP4-201ENST00000270061 PITPNM1O00562 1244 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 TBX3O15119 743 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 BFSP2Q13515 415 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 CEP55Q53EZ4 464 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 SCLYQ96I15 445 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 GSDMAQ96QA5 445 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 KCNH7Q9NS40 1196 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 PKD2L1Q9P0L9 805 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 LRWD1Q9UFC0 647 aa27.44■■□□□ 1.98
SSBP4-201ENST00000270061 MORC3Q14149 939 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 NAALADL2Q58DX5 795 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 ZNF365Q70YC5 407 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 CYP2W1Q8TAV3 490 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 MMTAG2Q9BU76 263 aaKnown RBP27.43■■□□□ 1.98
SSBP4-201ENST00000270061 TTC12Q9H892 705 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-201ENST00000270061 BECN2A8MW95 431 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 GOLGA6L19H0YKK7 550 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 GTPBP6O43824 516 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-201ENST00000270061 ZNF76P36508 570 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 AFMP43652 599 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 SLFN12Q8IYM2 578 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 RPUSD2Q8IZ73 545 aaKnown RBP27.43■■□□□ 1.98
SSBP4-201ENST00000270061 CCDC155Q8N6L0 562 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 RETREG2Q8NC44 543 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 CTAGE1Q96RT6 745 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 TELO2Q9Y4R8 837 aa27.43■■□□□ 1.98
SSBP4-201ENST00000270061 MYL1P05976 194 aa27.42■■□□□ 1.98
SSBP4-201ENST00000270061 CAGE1Q8TC20 777 aa27.42■■□□□ 1.98
SSBP4-201ENST00000270061 MTRQ99707 1265 aa27.42■■□□□ 1.98
SSBP4-201ENST00000270061 ZNF215Q9UL58 517 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-201ENST00000270061 TET1Q8NFU7 2136 aa27.42■■□□□ 1.98
SSBP4-201ENST00000270061 BMP6P22004 513 aa27.41■■□□□ 1.98
SSBP4-201ENST00000270061 MLKLQ8NB16 471 aa27.41■■□□□ 1.98
SSBP4-201ENST00000270061 PCDHA12Q9UN75 941 aa27.41■■□□□ 1.98
SSBP4-201ENST00000270061 CDH23Q9H251 3354 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 SLC26A4O43511 780 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 ADCY5O95622 1261 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 UTP14CQ5TAP6 766 aaKnown RBP27.4■■□□□ 1.98
SSBP4-201ENST00000270061 TRIM50Q86XT4 487 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 RASSF8Q8NHQ8 419 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 LENG9Q96B70 501 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 CALML4Q96GE6 196 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 KBTBD4Q9NVX7 518 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 SMTNL1A8MU46 457 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 MEIS1O00470 390 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 IKBKBO14920 756 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 AP5Z1O43299 807 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 MARCH6O60337 910 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 FGBP02675 491 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 TCF7P36402 384 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-201ENST00000270061 SMAD3P84022 425 aaKnown RBP27.4■■□□□ 1.98
SSBP4-201ENST00000270061 CT47A1Q5JQC4 288 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-201ENST00000270061 ISM2Q6H9L7 571 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 ETNPPLQ8TBG4 499 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 SEPT1Q8WYJ6 367 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 FAM20AQ96MK3 541 aa27.4■■□□□ 1.98
SSBP4-201ENST00000270061 JPH1Q9HDC5 661 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-201ENST00000270061 IQCF3P0C7M6 154 aa27.39■■□□□ 1.98
SSBP4-201ENST00000270061 ARP10275 920 aa27.39■■□□□ 1.98
SSBP4-201ENST00000270061 DEFB123Q8N688 67 aa27.39■■□□□ 1.98
SSBP4-201ENST00000270061 AOPEPQ8N6M6 819 aa27.39■■□□□ 1.98
SSBP4-201ENST00000270061 DACH1Q9UI36 760 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms