RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 SFNP31947 248 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 KPNA1P52294 538 aaPredicted RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 ALCAMQ13740 583 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 TTC39CQ8N584 583 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 TDRD7Q8NHU6 1098 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 SCFD2Q8WU76 684 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 XAB2Q9HCS7 855 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 KMT5AQ9NQR1 393 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 ALDH1A3P47895 512 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ZNF75DP51815 510 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 MTMR2Q13614 643 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ARL13BQ3SXY8 428 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 FAM83BQ5T0W9 1011 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 DDX53Q86TM3 631 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 OSBP2Q969R2 916 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 OPTNQ96CV9 577 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CCDC42Q96M95 316 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ZNF560Q96MR9 790 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SEZ6LQ9BYH1 1024 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 TNKSO95271 1327 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 GPR182O15218 404 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ATP8B1O43520 1251 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 IFT20Q8IY31 132 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 DPF2Q92785 391 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ZNF302Q9NR11 478 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 THEGQ9P2T0 379 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CPA4Q9UI42 421 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 AFG3L2Q9Y4W6 797 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 IKBKBO14920 756 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 HGSO14964 777 aaPredicted RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 MED7O43513 233 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PRMT3O60678 531 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PQBP1O60828 265 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 MARK3P27448 753 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 AFMP43652 599 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 HADHQ16836 314 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 ARMC6Q6NXE6 501 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PDXDC1Q6P996 788 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CROCCP2Q86T23 111 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CNGA4Q8IV77 575 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 DCP1BQ8IZD4 617 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 CCDC63Q8NA47 563 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 MYL10Q9BUA6 226 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 PPANQ9NQ55 473 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 MTUS1Q9ULD2 1270 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SUFUQ9UMX1 484 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SATB2Q9UPW6 733 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SH3BP1Q9Y3L3 701 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 TTC36A6NLP5 189 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 RNF8O76064 485 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 LDHAP00338 332 aaKnown RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 AKR1A1P14550 325 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CPA1P15085 419 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 CCDC122Q5T0U0 273 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 TTC23LQ6PF05 361 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 TAOK1Q7L7X3 1001 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 ZNF654Q8IZM8 581 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SPDYE1Q8NFV5 336 aaPredicted RBP8.45□□□□□ -1.06
USP3-201ENST00000268049 TSGA10Q9BZW7 698 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 SNX14Q9Y5W7 946 aa8.45□□□□□ -1.06
USP3-201ENST00000268049 GOLGA8KD6RF30 607 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 IPO5O00410 1097 aaKnown RBP8.44□□□□□ -1.06
USP3-201ENST00000268049 GNA14O95837 355 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 GAP43P17677 238 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 PAX3P23760 479 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 VPS41P49754 854 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 SLC12A2P55011 1212 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 IRX1P78414 480 aaPredicted RBP8.44□□□□□ -1.06
USP3-201ENST00000268049 AP3B2Q13367 1082 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
USP3-201ENST00000268049 TTC38Q5R3I4 469 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 ANKRD13CQ8N6S4 541 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 FBXO22Q8NEZ5 403 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 PSPC1Q8WXF1 523 aaKnown RBP8.44□□□□□ -1.06
USP3-201ENST00000268049 NLRP4Q96MN2 994 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 MRPL9Q9BYD2 267 aaKnown RBP8.44□□□□□ -1.06
USP3-201ENST00000268049 TTLL3Q9Y4R7 772 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 STAM2O75886 525 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 OR52Z1P0C646 297 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 ACADMP11310 421 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 IKBKEQ14164 716 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 KRT81Q14533 505 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 STARD3Q14849 445 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 TERF2Q15554 542 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 ATG9AQ7Z3C6 839 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 TBC1D19Q8N5T2 526 aa8.44□□□□□ -1.06
USP3-201ENST00000268049 USP6NLQ92738 828 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms