RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 RGL1Q9NZL6 768 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 GRID2IPA4D2P6 1211 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 WDR46O15213 610 aaKnown RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 SLFN11Q7Z7L1 901 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 TMEM39BQ9GZU3 492 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 BCAS3Q9H6U6 928 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 COL20A1Q9P218 1284 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 ARMCX3Q9UH62 379 aaPredicted RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 PFASO15067 1338 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 WNT10BO00744 389 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 ASNSP08243 561 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 MAGEA1P43355 309 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 POLR2FP61218 127 aaKnown RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 LRRC57Q8N9N7 239 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 SHTN1A0MZ66 631 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 ZNF185O15231 689 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 ARP10275 920 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 ITGB5P18084 799 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 RPL13P26373 211 aaKnown RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 PPP2R5AQ15172 486 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 IQCEQ6IPM2 695 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
MSH3-201ENST00000265081 KIAA1217Q5T5P2 1943 aa12.25□□□□□ -0.45
MSH3-201ENST00000265081 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 COG1Q8WTW3 980 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 ALS2CR12Q96Q35 445 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 GLIS2Q9BZE0 524 aaPredicted RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 OTOFQ9HC10 1997 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 DPEP1P16444 411 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 NPEPPSP55786 919 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 APBA1Q02410 837 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 CASP8Q14790 479 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 CCNI2Q6ZMN8 369 aaPredicted RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 LMO3Q8TAP4 145 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 NOX5Q96PH1 765 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 PARVGQ9HBI0 331 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 A0A087X0T9 212 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 MACROD2A1Z1Q3 448 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 LRRIQ3A6PVS8 624 aaPredicted RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 FAM228BP0C875 321 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 OAS2P29728 719 aaKnown RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 TGFB2P61812 414 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 SNRPFP62306 86 aaKnown RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 KCNA1Q09470 495 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 CACNA2D4Q7Z3S7 1137 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 ZNF571Q7Z3V5 609 aaPredicted RBP12.24□□□□□ -0.45
MSH3-201ENST00000265081 SENP7Q9BQF6 1050 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 ZSWIM4Q9H7M6 989 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 ZNF112Q9UJU3 913 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
MSH3-201ENST00000265081 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 ENPEPQ07075 957 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 ALCAMQ13740 583 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 TEKT3Q9BXF9 490 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 ZNF277Q9NRM2 450 aaPredicted RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 PNMA2Q9UL42 364 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 NCANO14594 1321 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 AKR1B10O60218 316 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 SLC9A1P19634 815 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 INPP5BP32019 993 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 CASP4P49662 377 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 EN1Q05925 392 aaPredicted RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 ASIC2Q16515 512 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 SPATA4Q8NEY3 305 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 ADAMTS5Q9UNA0 930 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 RAD17O75943 681 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSH3-201ENST00000265081 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
MSH3-201ENST00000265081 PTK2Q05397 1052 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 CXCL9Q07325 125 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 ZNF577Q9BSK1 485 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 MYOZ2Q9NPC6 264 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 JADE2Q9NQC1 790 aa12.23□□□□□ -0.45
MSH3-201ENST00000265081 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 EPB41P11171 864 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 RFX1P22670 979 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 GOLGA5Q8TBA6 731 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 PDGFDQ9GZP0 370 aaPredicted RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 HPCAL4Q9UM19 191 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms