RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 C22orf31O95567 290 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZSCAN22P10073 491 aaPredicted RBP8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 GNAT1P11488 350 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 PSMC5P62195 406 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 ATP2C1P98194 919 aaPredicted RBP8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 PTK7Q13308 1070 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 EPHA7Q15375 998 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 TMEM266Q2M3C6 531 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 TRIM71Q2Q1W2 868 aaKnown RBP8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 SNX29Q8TEQ0 813 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 CCDC43Q96MW1 224 aaKnown RBP8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■□□□□ 9.7
DEPDC1B-201ENST00000265036 POLD4Q9HCU8 107 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 LRWD1Q9UFC0 647 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 XIRP2A4UGR9 3374 aa8.12□□□□□ -1.11
DEPDC1B-201ENST00000265036 UNC80Q8N2C7 3258 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 NBNO60934 754 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 SLITRK3O94933 977 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 F13A1P00488 732 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 P4HBP07237 508 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 IQCF3P0C7M6 154 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 GHRP10912 638 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 SELPP16109 830 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 YWHABP31946 246 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 SLC26A2P50443 739 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 BFSP2Q13515 415 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 SHHQ15465 462 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 ECM1Q16610 540 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 KIZQ2M2Z5 673 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZNF365Q70YC5 407 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 C16orf59Q7L2K0 433 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 MAEAQ7L5Y9 396 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TMCO2Q7Z6W1 182 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CATSPER3Q86XQ3 398 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TMEM199Q8N511 208 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 VWCEQ96DN2 955 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 FAM167AQ96KS9 214 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CLIC6Q96NY7 704 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 AKT3Q9Y243 479 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TRANK1O15050 2925 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 GBF1Q92538 1859 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 MICAL3Q7RTP6 2002 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 MBLAC1A4D2B0 266 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 RSPH10B2B2RC85 870 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 PITPNM1O00562 1244 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CSDE1O75534 798 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 STBD1O95210 358 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 RSPH10BP0C881 870 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CCT6AP40227 531 aaKnown RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TCTN1Q2MV58 587 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 XKR9Q5GH70 373 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 XKR3Q5GH77 459 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 FAM109BQ6ICB4 259 aaPredicted RBP8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 DTHD1Q6ZMT9 781 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 RDM1Q8NG50 284 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CEP170P1Q96L14 293 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZDHHC9Q9Y397 364 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 CDY2AQ9Y6F7 541 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 PTPRSQ13332 1948 aa8.11□□□□□ -1.11
DEPDC1B-201ENST00000265036 USO1O60763 962 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 CHRNA1P02708 482 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 DNM1Q05193 864 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 GPNMBQ14956 572 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 EFCAB12Q6NXP0 572 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 USP49Q70CQ1 688 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 KSR1Q8IVT5 923 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 CCDC155Q8N6L0 562 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 TMEM143Q96AN5 459 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 SCLT1Q96NL6 688 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 OSMRQ99650 979 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 HSD17B14Q9BPX1 270 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 CYP26B1Q9NR63 512 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 KIAA1024Q9UPX6 916 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 RRN3P2A6NIE6 340 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 ANP32AP39687 249 aaKnown RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 POLGP54098 1239 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 ORC2Q13416 577 aaPredicted RBP8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 ZNF484Q5JVG2 852 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 TAF2Q6P1X5 1199 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 KCNK18Q7Z418 384 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 TDHQ8IZJ6 230 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 IGSF22Q8N9C0 903 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 TMEM40Q8WWA1 233 aa8.1□□□□□ -1.11
DEPDC1B-201ENST00000265036 SEZ6LQ9BYH1 1024 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms