RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 DDR1Q08345 913 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 SEPT14Q6ZU15 432 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 CEP170P1Q96L14 293 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 KLRC4O43908 158 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 NPY5RQ15761 445 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 METTL13Q8N6R0 699 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 DEPTORQ8TB45 409 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 PIM2Q9P1W9 311 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 ANKFY1Q9P2R3 1169 aa21.55■■□□□ 1.04
CSPG5-201ENST00000264723 KIF4AO95239 1232 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 NMT1P30419 496 aaKnown RBP21.54■■□□□ 1.04
CSPG5-201ENST00000264723 PBX1P40424 430 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 GNPTABQ3T906 1256 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 LRRC31Q6UY01 552 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 OTUD6AQ7L8S5 288 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 HOOK3Q86VS8 718 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 TNFRSF25Q93038 417 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 PRMT6Q96LA8 375 aaPredicted RBP21.54■■□□□ 1.04
CSPG5-201ENST00000264723 ERGIC2Q96RQ1 377 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 SEPT9Q9UHD8 586 aaPredicted RBP21.54■■□□□ 1.04
CSPG5-201ENST00000264723 CAPN12Q6ZSI9 719 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 APTXQ7Z2E3 356 aaKnown RBP21.54■■□□□ 1.04
CSPG5-201ENST00000264723 DEFB132Q7Z7B7 95 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 A0A1W2PRG0 241 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 COPB2P35606 906 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 SEC24CP53992 1094 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 TMEM39BQ9GZU3 492 aa21.54■■□□□ 1.04
CSPG5-201ENST00000264723 AFDNP55196 1824 aaKnown RBP21.54■■□□□ 1.04
CSPG5-201ENST00000264723 NR3C1P04150 777 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 SNX1Q13596 522 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 SYCE1Q8N0S2 351 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 MAGOHBQ96A72 148 aaKnown RBP21.53■■□□□ 1.04
CSPG5-201ENST00000264723 AS3MTQ9HBK9 375 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 FBXO28Q9NVF7 368 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 RAB21Q9UL25 225 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 PSMC2P35998 433 aaKnown RBP21.53■■□□□ 1.04
CSPG5-201ENST00000264723 LIG4P49917 911 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 AP3B2Q13367 1082 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 SLIT3O75094 1523 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 NT5C2P49902 561 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 TAB3Q8N5C8 712 aaPredicted RBP21.53■■□□□ 1.04
CSPG5-201ENST00000264723 KIFAP3Q92845 792 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 SNX24Q9Y343 169 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 ZHX2Q9Y6X8 837 aa21.53■■□□□ 1.04
CSPG5-201ENST00000264723 DDTLA6NHG4 134 aaPredicted RBP21.52■■□□□ 1.04
CSPG5-201ENST00000264723 MYBP10242 640 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 IRAK1P51617 712 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 PEX3P56589 373 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 TRPC3Q13507 836 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 SULF1Q8IWU6 871 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 UBE2TQ9NPD8 197 aaPredicted RBP21.52■■□□□ 1.04
CSPG5-201ENST00000264723 MTUS1Q9ULD2 1270 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
CSPG5-201ENST00000264723 RSPH10B2B2RC85 870 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 DAPK3O43293 454 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 RSPH10BP0C881 870 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 ZIM3Q96PE6 472 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 RMDN3Q96TC7 470 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
CSPG5-201ENST00000264723 MAP2K7O14733 419 aa21.52■■□□□ 1.04
CSPG5-201ENST00000264723 PAPD7Q5XG87 772 aaKnown RBP21.52■■□□□ 1.04
CSPG5-201ENST00000264723 POLGP54098 1239 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 DMP1Q13316 513 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 ZC2HC1CQ53FD0 456 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 DENND2CQ68D51 928 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 UBL4BQ8N7F7 174 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 WRNIP1Q96S55 665 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 DKC1O60832 514 aaKnown RBP eCLIP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 ECE1P42892 770 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 PTK2Q05397 1052 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 RASA3Q14644 834 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 TRIP13Q15645 432 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 KNOP1Q1ED39 458 aaKnown RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 CENPPQ6IPU0 288 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 HHIPL2Q6UWX4 724 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 DNAJC12Q9UKB3 198 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 RGS16O15492 202 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 GBP2P32456 591 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-201ENST00000264723 IGBP1P78318 339 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 MTERF2Q49AM1 385 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 ACER1Q8TDN7 264 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 SUGT1Q9Y2Z0 365 aa21.51■■□□□ 1.03
CSPG5-201ENST00000264723 MYL7Q01449 175 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 ALS2CLQ60I27 953 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 WDR93Q6P2C0 686 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 PNMA5Q96PV4 448 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 ZFPM1Q8IX07 1006 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 BLOC1S4Q9NUP1 217 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 SAMD15Q9P1V8 674 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 PRR12Q9ULL5 1215 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 IVNS1ABPQ9Y6Y0 642 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 TARSL2A2RTX5 802 aaKnown RBP21.5■■□□□ 1.03
CSPG5-201ENST00000264723 MAGEA9P43362 315 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 LDHDQ86WU2 507 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 ANKS4BQ8N8V4 417 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 ZNF507Q8TCN5 953 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 REEP2Q9BRK0 252 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 CELF4Q9BZC1 486 aaKnown RBP21.5■■□□□ 1.03
CSPG5-201ENST00000264723 IPO5O00410 1097 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms