RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHMP3-201ENST00000263856 PLTPP55058 493 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 CHADLQ6NUI6 762 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 CCDC91Q7Z6B0 441 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 CCDC25Q86WR0 208 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 AIPL1Q9NZN9 384 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 AMFRQ9UKV5 643 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 A6NNZ2 444 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 NR3C1P04150 777 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 IFNAR2P48551 515 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 GALCP54803 685 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 SPRED3Q2MJR0 410 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 TUBB8Q3ZCM7 444 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 PBKQ96KB5 322 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 MYH7BA7E2Y1 1941 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 MAP2K2P36507 400 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 PPP2R2AP63151 447 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
CHMP3-201ENST00000263856 SYN2Q92777 582 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-201ENST00000263856 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CUL1Q13616 776 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CNPY4Q8N129 248 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CYP2W1Q8TAV3 490 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 EVI5O60447 810 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CTNND1O60716 968 aaKnown RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 ECHS1P30084 290 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 STAT1P42224 750 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 COG2Q14746 738 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 GGT7Q9UJ14 662 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.255e-10■■■□□ 17.8
CHMP3-201ENST00000263856 ZBTB39O15060 712 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 FAM13AO94988 1023 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 GIT2Q14161 759 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 MREGQ8N565 214 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
CHMP3-201ENST00000263856 MGARPQ8TDB4 240 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 FMO2Q99518 471 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 KLC4Q9NSK0 619 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 PCDHA2Q9Y5H9 948 aa13.48□□□□□ -0.25
CHMP3-201ENST00000263856 ORC2Q13416 577 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-201ENST00000263856 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SLC35G2Q8TBE7 412 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 LMBR1Q8WVP7 490 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 MYCBPQ99417 103 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-201ENST00000263856 RUSC1Q9BVN2 902 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SLC40A1Q9NP59 571 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 CAND2O75155 1236 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 GDF11O95390 407 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SHBGP04278 402 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SEPT2Q15019 361 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 CCDC38Q502W7 563 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 SEC16BQ96JE7 1060 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 LAMB2P55268 1798 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
CHMP3-201ENST00000263856 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 OPLAHO14841 1288 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-201ENST00000263856 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms