RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NEK9Q8TD19 979 aa20.52■□□□□ 0.87
SDF4-201ENST00000263741 RPA1P27694 616 aa20.51■□□□□ 0.87
SDF4-201ENST00000263741 C4orf19Q8IY42 314 aa20.51■□□□□ 0.87
SDF4-201ENST00000263741 TUFT1Q9NNX1 390 aa20.51■□□□□ 0.87
SDF4-201ENST00000263741 SRPRBQ9Y5M8 271 aaKnown RBP20.51■□□□□ 0.87
SDF4-201ENST00000263741 TET1Q8NFU7 2136 aa20.51■□□□□ 0.87
SDF4-201ENST00000263741 KRT85P78386 507 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 KRT79Q5XKE5 535 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 SERINC5Q86VE9 423 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 KRI1Q8N9T8 703 aaKnown RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 EPSTI1Q96J88 318 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 POLR3CQ9BUI4 534 aaPredicted RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 FAM49AQ9H0Q0 323 aaPredicted RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 KLRC1P26715 233 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 L1TD1Q5T7N2 865 aaKnown RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 SEZ6LQ9BYH1 1024 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 NRBP2Q9NSY0 501 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 DDX19AQ9NUU7 478 aaKnown RBP20.5■□□□□ 0.87
SDF4-201ENST00000263741 CFAP45Q9UL16 551 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 KIAA1024Q9UPX6 916 aa20.5■□□□□ 0.87
SDF4-201ENST00000263741 COL1A2P08123 1366 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 C22orf31O95567 290 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 GNAT1P11488 350 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 CYP2C18P33260 490 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 LONP1P36776 959 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 ZNF484Q5JVG2 852 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 MTHFD1LQ6UB35 978 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 CABP7Q86V35 215 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 LRRC71Q8N4P6 559 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 LEO1Q8WVC0 666 aaPredicted RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 SYMPKQ92797 1274 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 PNMA5Q96PV4 448 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 HIPK3Q9H422 1215 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 ATP6V1DQ9Y5K8 247 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 MBLAC1A4D2B0 266 aaPredicted RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 RRN3P2A6NIE6 340 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 CTSHP09668 335 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 ME1P48163 572 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 KARSQ15046 597 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 TARBP2Q15633 366 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 XKR9Q5GH70 373 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 CEP170P1Q96L14 293 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 NIFKQ9BYG3 293 aaKnown RBP20.49■□□□□ 0.87
SDF4-201ENST00000263741 CYP26B1Q9NR63 512 aa20.49■□□□□ 0.87
SDF4-201ENST00000263741 MYH11P35749 1972 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 RANBP2P49792 3224 aaKnown RBP20.48■□□□□ 0.87
SDF4-201ENST00000263741 DKC1O60832 514 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■■□ 26.5
SDF4-201ENST00000263741 CLCN3P51790 818 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 TMEM62Q0P6H9 643 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 GRB10Q13322 594 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 ATL3Q6DD88 541 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 METTL13Q8N6R0 699 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 LRRC15Q8TF66 581 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 DNAJB3Q8WWF6 145 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 PPP1R16BQ96T49 567 aa20.48■□□□□ 0.87
SDF4-201ENST00000263741 PPP6R2O75170 966 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 LYPLA2O95372 231 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 UBA7P41226 1012 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 CCL23P55773 120 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 PTK7Q13308 1070 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 DRP2Q13474 957 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 TRIM71Q2Q1W2 868 aaKnown RBP20.47■□□□□ 0.87
SDF4-201ENST00000263741 AK8Q96MA6 479 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 PRKAG2Q9UGJ0 569 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 E9PMD0 336 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 H0YGN5 161 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 KIAA0355O15063 1070 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 RAG1P15918 1043 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 THPOP40225 353 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 TBC1D8BQ0IIM8 1120 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 RASSF8Q8NHQ8 419 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 KCNG4Q8TDN1 519 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 TNPO1Q92973 898 aaKnown RBP20.47■□□□□ 0.87
SDF4-201ENST00000263741 SCLYQ96I15 445 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 RCOR1Q9UKL0 485 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 NR2E3Q9Y5X4 410 aa20.47■□□□□ 0.87
SDF4-201ENST00000263741 MORC2Q9Y6X9 1032 aaPredicted RBP20.47■□□□□ 0.87
SDF4-201ENST00000263741 RARRES1P49788 294 aa20.46■□□□□ 0.87
SDF4-201ENST00000263741 CCDC43Q96MW1 224 aaKnown RBP20.46■□□□□ 0.87
SDF4-201ENST00000263741 SUGCTQ9HAC7 445 aa20.46■□□□□ 0.87
SDF4-201ENST00000263741 CKBP12277 381 aa20.46■□□□□ 0.87
SDF4-201ENST00000263741 MDM2Q00987 491 aaPredicted RBP20.46■□□□□ 0.87
SDF4-201ENST00000263741 AXDND1Q5T1B0 1012 aaPredicted RBP20.46■□□□□ 0.87
SDF4-201ENST00000263741 CDK5RAP3Q96JB5 506 aa20.46■□□□□ 0.87
SDF4-201ENST00000263741 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
SDF4-201ENST00000263741 KDM3AQ9Y4C1 1321 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 USO1O60763 962 aaKnown RBP20.45■□□□□ 0.86
SDF4-201ENST00000263741 PLCG1P19174 1290 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 ZNF618Q5T7W0 954 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 EFCAB12Q6NXP0 572 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 SHC4Q6S5L8 630 aa20.45■□□□□ 0.86
SDF4-201ENST00000263741 OTUD6AQ7L8S5 288 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms