RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF302Q9NR11 478 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
PFDN1-201ENST00000261813 PCDHA12Q9UN75 941 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 SAMM50Q9Y512 469 aa13□□□□□ -0.33
PFDN1-201ENST00000261813 MROH7Q68CQ1 1323 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 IGSF9BQ9UPX0 1349 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 BACH1O14867 736 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 B4GALT4O60513 344 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 CD4P01730 458 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 PSAPP07602 524 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 PTPN11Q06124 597 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 UGCGQ16739 394 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 FAM160B1Q5W0V3 765 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 GDF6Q6KF10 455 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 FTOQ9C0B1 505 aaKnown RBP eCLIP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 TRMT13Q9NUP7 481 aaKnown RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 GTF2IRD1Q9UHL9 959 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-201ENST00000261813 SZT2Q5T011 3432 aa12.99□□□□□ -0.33
PFDN1-201ENST00000261813 DNAH12Q6ZR08 3092 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 ZNF862O60290 1169 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 HOXC8P31273 242 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 TECP42680 631 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 NASPP49321 788 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-201ENST00000261813 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-201ENST00000261813 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 STK38Q15208 465 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 IL17AQ16552 155 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-201ENST00000261813 PDXDC2PQ6P474 469 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-201ENST00000261813 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 CTAGE1Q96RT6 745 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
PFDN1-201ENST00000261813 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
PFDN1-201ENST00000261813 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 LAD1O00515 517 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 PPP6R2O75170 966 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 CLTBP09497 229 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 PRPHP41219 470 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 SLC26A2P50443 739 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
PFDN1-201ENST00000261813 SLC39A14Q15043 492 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 EPHA7Q15375 998 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 SETD4Q9NVD3 440 aa12.97□□□□□ -0.33
PFDN1-201ENST00000261813 TFIP11Q9UBB9 837 aaKnown RBP12.97□□□□□ -0.33
PFDN1-201ENST00000261813 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 STBD1O95210 358 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 MBD3O95983 291 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 ADAM17P78536 824 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 PTPAQ15257 358 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 DYDC2Q96IM9 177 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 RGL1Q9NZL6 768 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-201ENST00000261813 TBX21Q9UL17 535 aa12.96□□□□□ -0.33
PFDN1-201ENST00000261813 SPTLC2O15270 562 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 GPR37O15354 613 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 TREHO43280 583 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 SLITRK3O94933 977 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 OATP04181 439 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 P4HBP07237 508 aaKnown RBP12.95□□□□□ -0.34
PFDN1-201ENST00000261813 CYP2C9P11712 490 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 INSRRP14616 1297 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
PFDN1-201ENST00000261813 PSMC5P62195 406 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 UBE2HP62256 183 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 PRKCEQ02156 737 aa12.95□□□□□ -0.34
PFDN1-201ENST00000261813 CYP4A11Q02928 519 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms