RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 FOXD4Q12950 439 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 PYROXD1Q8WU10 500 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SPC25Q9HBM1 224 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 SFI1A8K8P3 1242 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 GOLGA8MH3BSY2 632 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 UBTFL6P0CB48 400 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 LSP1P33241 339 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 OCA2Q04671 838 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 KLC1Q07866 573 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 ARL6IP4Q66PJ3 421 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCDC68Q9H2F9 335 aa10.47□□□□□ -0.73
CTDSPL2-201ENST00000260327 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 NLRX1Q86UT6 975 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 CRLF3Q8IUI8 442 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 PRPF31Q8WWY3 499 aaKnown RBP10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 POLR2MP0CAP2 368 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 SERPINB4P48594 390 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 MFAP3P55082 362 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 KRT26Q7Z3Y9 468 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 KIAA2013Q8IYS2 634 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 ICA1LQ8NDH6 482 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 DLGAP2Q9P1A6 1054 aa10.46□□□□□ -0.73
CTDSPL2-201ENST00000260327 TARSL2A2RTX5 802 aaKnown RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CHN1P15882 459 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 FGFR4P22455 802 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CYTH1Q15438 398 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 DEPTORQ8TB45 409 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CEP19Q96LK0 163 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZFXP17010 805 aaPredicted RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 HSPA6P17066 643 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 RAPGEF5Q92565 580 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 HEMGNQ9BXL5 484 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ALDH8A1Q9H2A2 487 aaPredicted RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CYP2D6P10635 497 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ACTN1P12814 892 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ALAS1P13196 640 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ICA1Q05084 483 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ATG16L1Q676U5 607 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCDC124Q96CT7 223 aaKnown RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 CYFIP2Q96F07 1278 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 NBPF3Q9H094 633 aa10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 ALG13Q9NP73 1137 aaKnown RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 SCHIP1Q9P0W5 487 aaPredicted RBP10.46□□□□□ -0.74
CTDSPL2-201ENST00000260327 POTEMA6NI47 508 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 PTK2Q05397 1052 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 LRRC63Q05C16 580 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 TEKT3Q9BXF9 490 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 INPP5FQ9Y2H2 1132 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 MYBL1P10243 752 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 PIK3CAP42336 1068 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 CRKLP46109 303 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 SPATA21Q7Z572 469 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 RASSF3Q86WH2 238 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 NSMCE1Q8WV22 266 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 USP6NLQ92738 828 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 TSC22D4Q9Y3Q8 395 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 PCDHB4Q9Y5E5 795 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 QRICH2Q9H0J4 1663 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARHGAP10A1A4S6 786 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 STAT2P52630 851 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 MECOMQ03112 1051 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 RINT1Q6NUQ1 792 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 SESTD1Q86VW0 696 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ANKFY1Q9P2R3 1169 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ORC6Q9Y5N6 252 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARFIP2P53365 341 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 PCGF5Q86SE9 256 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 NOA1Q8NC60 698 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 VIPAS39Q9H9C1 493 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 NOD2Q9HC29 1040 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 AMACRQ9UHK6 382 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 AP5Z1O43299 807 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 CTCFP49711 727 aaPredicted RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 PMS1P54277 932 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 SCARF1Q14162 830 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 HLFQ16534 295 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 DARS2Q6PI48 645 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMC4Q7Z404 712 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 DEPDC1BQ8WUY9 529 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 DTNBP1Q96EV8 351 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 NT5C1BQ96P26 610 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 TTC7AQ9ULT0 858 aaPredicted RBP10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 HEG1Q9ULI3 1381 aa10.45□□□□□ -0.74
CTDSPL2-201ENST00000260327 SERPINB3P29508 390 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 NBPF20Q3BBV1 942 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 TSGA10IPQ3SY00 556 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ERFEQ4G0M1 354 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZBTB41Q5SVQ8 909 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms