RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 POTEB3A0JP26 581 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 POTEBQ6S5H4 581 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SLC38A10Q9HBR0 1119 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 ITGA4P13612 1032 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SP3Q02447 781 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SPATA1Q5VX52 437 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 TMEM199Q8N511 208 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 RPGRIP1Q96KN7 1286 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 PLCD4Q9BRC7 762 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 HOMER3Q9NSC5 361 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 ANAPC5Q9UJX4 755 aa14.56□□□□□ -0.08
PRPF38A-201ENST00000257181 SLFN14P0C7P3 912 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 TM4SF1P30408 202 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 SCRN1Q12765 414 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 MSL3Q8N5Y2 521 aaKnown RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 CEP63Q96MT8 703 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 PPP1R2P1Q96PQ5 205 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 THAP9Q9H5L6 903 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 PFKFB1P16118 471 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 DDNO94850 711 aaPredicted RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 MXI1P50539 228 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 POTEAQ6S8J7 498 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 BAG1Q99933 345 aaPredicted RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 STAP1Q9ULZ2 295 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 PCDHB12Q9Y5F1 795 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 GMNNO75496 209 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 ENAHQ8N8S7 591 aaPredicted RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 NSUN7Q8NE18 718 aaKnown RBP14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 ATP2A3Q93084 1043 aa14.55□□□□□ -0.08
PRPF38A-201ENST00000257181 C4orf50Q6ZRC1 276 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 ARFGAP2Q8N6H7 521 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 SECISBP2LQ93073 1101 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 POLLQ9UGP5 575 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 DSEQ9UL01 958 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 KCNJ18B7U540 433 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 S100BP04271 92 aaPredicted RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 MARK3P27448 753 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 ARPP19P56211 112 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 KCNJ12Q14500 433 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 MAN2A1Q16706 1144 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 SWSAP1Q6NVH7 229 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 RSAD2Q8WXG1 361 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 UPF1Q92900 1129 aaKnown RBP eCLIP14.54□□□□□ -0.083e-7■□□□□ 8.7
PRPF38A-201ENST00000257181 P2RX5Q93086 422 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 POLR3FQ9H1D9 316 aaPredicted RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 EVA1BQ9NVM1 165 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PARP4Q9UKK3 1724 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 NR2F2P24468 414 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 KIF23Q02241 960 aaPredicted RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 CCDC122Q5T0U0 273 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 IQSEC1Q6DN90 963 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PPP1R9AQ9ULJ8 1098 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PRR12Q9ULL5 1215 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PHBP35232 272 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 KPNA2P52292 529 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 BAATQ14032 418 aaPredicted RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 UBE2SQ16763 222 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 SV2CQ496J9 727 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 TAF2Q6P1X5 1199 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 PPM1KQ8N3J5 372 aa14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 UTP11Q9Y3A2 253 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-201ENST00000257181 NOLC1Q14978 699 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 NOTUMQ6P988 496 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 MB21D2Q8IYB1 491 aaPredicted RBP14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 FAN1Q9Y2M0 1017 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 SH3BP5O60239 455 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 TADA2AO75478 443 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 MAGEA1P43355 309 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 NECTIN1Q15223 517 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 ABHD16BQ9H3Z7 469 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 TYW1Q9NV66 732 aaKnown RBP14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 SUCLA2Q9P2R7 463 aaPredicted RBP14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 hCG_1642624A0A1W2PR95 340 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 SORBS3O60504 671 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 EYA4O95677 639 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 DNA2P51530 1060 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 PI16Q6UXB8 463 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 SYT17Q9BSW7 474 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 AHDC1Q5TGY3 1603 aaPredicted RBP14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 APOEP02649 317 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 HSPA6P17066 643 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 AXLP30530 894 aa14.53□□□□□ -0.08
PRPF38A-201ENST00000257181 DSG3P32926 999 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms