RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 CTNNBL1Q8WYA6 563 aaPredicted RBP12.66□□□□□ -0.38
VRTN-201ENST00000256362 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
VRTN-201ENST00000256362 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
VRTN-201ENST00000256362 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 RASSF9O75901 435 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 ELF3P78545 371 aaPredicted RBP12.66□□□□□ -0.38
VRTN-201ENST00000256362 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
VRTN-201ENST00000256362 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 GJB7Q6PEY0 223 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 CAPN12Q6ZSI9 719 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 GPBP1Q86WP2 473 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 TMBIM4Q9HC24 238 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 ABCF3Q9NUQ8 709 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
VRTN-201ENST00000256362 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 MYL1P05976 194 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 AKR1B1P15121 316 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 SLC9A1P19634 815 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 SCNN1DP51172 638 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 ATP11AP98196 1134 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 CCDC6Q16204 474 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
VRTN-201ENST00000256362 ZNF449Q6P9G9 518 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 NOP53Q9NZM5 478 aaKnown RBP12.65□□□□□ -0.38
VRTN-201ENST00000256362 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 IGF2BP3O00425 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
VRTN-201ENST00000256362 FGGP02679 453 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 PSMD2Q13200 908 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
VRTN-201ENST00000256362 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.38
VRTN-201ENST00000256362 VSIG1Q86XK7 387 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 GLG1Q92896 1179 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 NEUROG2Q9H2A3 272 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 SHBGP04278 402 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 FGFR4P22455 802 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 DDR1Q08345 913 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 IKQ13123 557 aaPredicted RBP12.65□□□□□ -0.38
VRTN-201ENST00000256362 ADAM9Q13443 819 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
VRTN-201ENST00000256362 RTCBQ9Y3I0 505 aaKnown RBP12.65□□□□□ -0.38
VRTN-201ENST00000256362 A0A1B0GUL6 1792 aa12.65□□□□□ -0.39
VRTN-201ENST00000256362 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CCT8L1PA6NM43 557 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CLIC2O15247 247 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 UBOX5O94941 541 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CASP5P51878 434 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CACNB3P54284 484 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 GUF1Q8N442 669 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 CCDC189A1A4V9 331 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 NOL4O94818 638 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 ACSL3O95573 720 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 FKBP3Q00688 224 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 GALNT17Q6IS24 598 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 FMO2Q99518 471 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 LRRC4CQ9HCJ2 640 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 GTF2IP78347 998 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 IFI35P80217 286 aaPredicted RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 OSBPL1AQ9BXW6 950 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
VRTN-201ENST00000256362 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
VRTN-201ENST00000256362 ARAP2Q8WZ64 1704 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
VRTN-201ENST00000256362 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 NR2F2P24468 414 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 GPSM2P81274 684 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 RNASELQ05823 741 aaKnown RBP12.63□□□□□ -0.39
VRTN-201ENST00000256362 TCP10Q12799 353 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 USH1GQ495M9 461 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
VRTN-201ENST00000256362 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms