RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MARCH6O60337 910 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 KLRC1P26715 233 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 PSMC5P62195 406 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 GNL2Q13823 731 aaKnown RBP14.36□□□□□ -0.11
VPREB3-201ENST00000248948 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 TSHZ1Q6ZSZ6 1077 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 Q7L0L9 218 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 ZNF710Q8N1W2 664 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 DBF4BQ8NFT6 615 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 NEK9Q8TD19 979 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 TTYH1Q9H313 450 aaPredicted RBP14.36□□□□□ -0.11
VPREB3-201ENST00000248948 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
VPREB3-201ENST00000248948 GRXCR1A8MXD5 290 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
VPREB3-201ENST00000248948 PBX2P40425 430 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 QARSP47897 775 aaKnown RBP14.35□□□□□ -0.11
VPREB3-201ENST00000248948 LPIN1Q14693 890 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 FBXO47Q5MNV8 452 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 LINC01465Q8N7H1 131 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 ZBTB10Q96DT7 871 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 NIFKQ9BYG3 293 aaKnown RBP14.35□□□□□ -0.11
VPREB3-201ENST00000248948 SEPT9Q9UHD8 586 aaPredicted RBP14.35□□□□□ -0.11
VPREB3-201ENST00000248948 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
VPREB3-201ENST00000248948 PPME1Q9Y570 386 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 TTC3P53804 2025 aa14.35□□□□□ -0.11
VPREB3-201ENST00000248948 KIAA1671Q9BY89 1806 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 TRANK1O15050 2925 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 EML1O00423 815 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 WNT7AO00755 349 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 AMHP03971 560 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 GHRP10912 638 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 GJB2P29033 226 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 DEFB103AP81534 67 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 EPHA7Q15375 998 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
VPREB3-201ENST00000248948 BANK1Q8NDB2 785 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 GUCD1Q96NT3 240 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 MTMR9Q96QG7 549 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 LXNQ9BS40 222 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
VPREB3-201ENST00000248948 CHD7Q9P2D1 2997 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 PCDHA12Q9UN75 941 aa14.34□□□□□ -0.11
VPREB3-201ENST00000248948 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
VPREB3-201ENST00000248948 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 STBD1O95210 358 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 GJB5O95377 273 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 P4HBP07237 508 aaKnown RBP14.33□□□□□ -0.12
VPREB3-201ENST00000248948 TMOD1P28289 359 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 TBC1D8BQ0IIM8 1120 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 CUL4AQ13619 759 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 TTC38Q5R3I4 469 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 PPP2R2DQ66LE6 453 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 C4orf19Q8IY42 314 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 KIAA0319LQ8IZA0 1049 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 ZNF576Q9H609 170 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
VPREB3-201ENST00000248948 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 SMC3Q9UQE7 1217 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
VPREB3-201ENST00000248948 OR52Z1P0C646 297 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 MCM7P33993 719 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 RABGGTBP53611 331 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 PAK2Q13177 524 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 ODR4Q5SWX8 454 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 METTL13Q8N6R0 699 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 JPH2Q9BR39 696 aaPredicted RBP14.32□□□□□ -0.12
VPREB3-201ENST00000248948 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
VPREB3-201ENST00000248948 COL6A3P12111 3177 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 H3BQV1 296 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 LAD1O00515 517 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 TLL1O43897 1013 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 LYPLA2O95372 231 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 CA3P07451 260 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 CLCN3P51790 818 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 CRYBB1P53674 252 aaPredicted RBP14.31□□□□□ -0.12
VPREB3-201ENST00000248948 MTERF2Q49AM1 385 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 EFCAB12Q6NXP0 572 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 ANO5Q75V66 913 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 TRMT1LQ7Z2T5 733 aaKnown RBP14.31□□□□□ -0.12
VPREB3-201ENST00000248948 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 FAM161BQ96MY7 647 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 TMEM60Q9H2L4 133 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
VPREB3-201ENST00000248948 CYP26B1Q9NR63 512 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 AKT3Q9Y243 479 aa14.31□□□□□ -0.12
VPREB3-201ENST00000248948 FNDC1Q4ZHG4 1894 aaPredicted RBP14.31□□□□□ -0.12
VPREB3-201ENST00000248948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 POTEMA6NI47 508 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms