RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 SLC5A5Q92911 643 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 AJAP1Q9UKB5 411 aaPredicted RBP17.29■□□□□ 0.36
LRFN1-201ENST00000248668 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
LRFN1-201ENST00000248668 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FTCDO95954 541 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 SERPING1P05155 500 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
LRFN1-201ENST00000248668 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 C1orf186Q6ZWK4 172 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 GANQ9H2C0 597 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 GOLPH3Q9H4A6 298 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 PDE11AQ9HCR9 933 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 TYW1Q9NV66 732 aaKnown RBP17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FLOT1O75955 427 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 EPB41P11171 864 aaKnown RBP17.28■□□□□ 0.36
LRFN1-201ENST00000248668 MUM1L1Q5H9M0 696 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 PARVGQ9HBI0 331 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 PDXKO00764 312 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 N4BP1O75113 896 aaKnown RBP17.28■□□□□ 0.36
LRFN1-201ENST00000248668 MYCLP12524 364 aaPredicted RBP17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FAM160B2Q86V87 743 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 MS4A14Q96JA4 679 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 ALS2CR12Q96Q35 445 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■■■ 115.4
LRFN1-201ENST00000248668 RAB21Q9UL25 225 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 FAM184BQ9ULE4 1060 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 SNX12Q9UMY4 172 aa17.28■□□□□ 0.36
LRFN1-201ENST00000248668 H3BQF6 201 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 ERLIN1O75477 346 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 KLRC1P26715 233 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 KCTD19Q17RG1 926 aaPredicted RBP17.27■□□□□ 0.36
LRFN1-201ENST00000248668 KIAA0753Q2KHM9 967 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 TEKT3Q9BXF9 490 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 KCNH7Q9NS40 1196 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 GCNT4Q9P109 453 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 ZNF536O15090 1300 aa17.27■□□□□ 0.36
LRFN1-201ENST00000248668 TISP43B9A030 160 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 POTEB2H3BUK9 544 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 PHACTR2O75167 634 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 TRIM49P0CI25 452 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 TRIM49CP0CI26 452 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 UCHL3P15374 230 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 PON1P27169 355 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 MARSP56192 900 aaKnown RBP17.27■□□□□ 0.35
LRFN1-201ENST00000248668 PPP2R5CQ13362 524 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 ZNF662Q6ZS27 426 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 AGBL3Q8NEM8 1001 aa17.27■□□□□ 0.35
LRFN1-201ENST00000248668 USP14P54578 494 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 PTK2Q05397 1052 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 MTMR2Q13614 643 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 SLC7A5Q01650 507 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 FRMD5Q7Z6J6 570 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 SLC35C1Q96A29 364 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 OSBPL9Q96SU4 736 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 SSU72P8A0A1W2PR75 194 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 ANO9A1A5B4 782 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 SORBS3O60504 671 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 TRAF1Q13077 416 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 FAM83AQ86UY5 434 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 CREG2Q8IUH2 290 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 NOX5Q96PH1 765 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 MXRA8Q9BRK3 442 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 PCIF1Q9H4Z3 704 aa17.26■□□□□ 0.35
LRFN1-201ENST00000248668 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.26■□□□□ 0.35
LRFN1-201ENST00000248668 PALMO75781 387 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 LCA5LO95447 670 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 PTGER2P43116 358 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 CKAP4Q07065 602 aaKnown RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 CCDC181Q5TID7 509 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 FOXR2Q6PJQ5 311 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 SYCP3Q8IZU3 236 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 ZMYM2Q9UBW7 1377 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 HIP1RO75146 1068 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 ICAM1P05362 532 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 MYBL2P10244 700 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 KLHDC7AQ5VTJ3 777 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 ZNF571Q7Z3V5 609 aaPredicted RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 ZC3H3Q8IXZ2 948 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms