RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 USP11P51784 963 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 FMO2Q99518 471 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 PAIP2Q9BPZ3 127 aaKnown RBP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 RTFDC1Q9BY42 306 aaPredicted RBP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 AZI2Q9H6S1 392 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 CTTNBP2NLQ9P2B4 639 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 STK38LQ9Y2H1 464 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 IFI35P80217 286 aaPredicted RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 SNX1Q13596 522 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 MESDQ14696 234 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 CTNNBL1Q8WYA6 563 aaPredicted RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 OSBPL7Q9BZF2 842 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 ACP6Q9NPH0 428 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 TAS2R14Q9NYV8 317 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 RNF14Q9UBS8 474 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 STAT1P42224 750 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 IRF2BP2Q7Z5L9 587 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 CATSPER3Q86XQ3 398 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 SYCP3Q8IZU3 236 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 SLC35G2Q8TBE7 412 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 NUCKS1Q9H1E3 243 aaKnown RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 USP40Q9NVE5 1235 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 ODF2LQ9ULJ1 636 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 LCA5LO95447 670 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 CPP00450 1065 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 GBP2P32456 591 aaPredicted RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 NAA25Q14CX7 972 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
SGPP1-201ENST00000247225 PCDHGC5Q9Y5F6 944 aa18.34■□□□□ 0.53
SGPP1-201ENST00000247225 PLCG2P16885 1265 aa18.33■□□□□ 0.53
SGPP1-201ENST00000247225 ITIH3Q06033 890 aa18.33■□□□□ 0.53
SGPP1-201ENST00000247225 IFI16Q16666 785 aaKnown RBP18.33■□□□□ 0.53
SGPP1-201ENST00000247225 CLEC4GQ6UXB4 293 aa18.33■□□□□ 0.53
SGPP1-201ENST00000247225 ZKSCAN4Q969J2 545 aaPredicted RBP18.33■□□□□ 0.53
SGPP1-201ENST00000247225 HVCN1Q96D96 273 aa18.33■□□□□ 0.53
SGPP1-201ENST00000247225 BTBD6Q96KE9 485 aa18.33■□□□□ 0.53
SGPP1-201ENST00000247225 DHX36Q9H2U1 1008 aaKnown RBP18.33■□□□□ 0.53
SGPP1-201ENST00000247225 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.524e-8■■■■■ 27.3
SGPP1-201ENST00000247225 EVI5O60447 810 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 NR3C1P04150 777 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 CCDC172P0C7W6 258 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 FNTAP49354 379 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 PSMD2Q13200 908 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 ARSHQ5FYA8 562 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 NSMFQ6X4W1 530 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 SUGP1Q8IWZ8 645 aaKnown RBP18.33■□□□□ 0.52
SGPP1-201ENST00000247225 CNPY4Q8N129 248 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 IQCDQ96DY2 449 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
SGPP1-201ENST00000247225 PNMA6FA0A0J9YX94 578 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 FAM13AO94988 1023 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 GDF11O95390 407 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 MMEP08473 750 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 CHN1P15882 459 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.52
SGPP1-201ENST00000247225 PROM2Q8N271 834 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 TBK1Q9UHD2 729 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 DAAM1Q9Y4D1 1078 aa18.33■□□□□ 0.52
SGPP1-201ENST00000247225 NUP98P52948 1817 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 RGS16O15492 202 aaPredicted RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 SKAP2O75563 359 aaPredicted RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 SCP2P22307 547 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 GJC1P36383 396 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 DR1Q01658 176 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 PDIA5Q14554 519 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 DRAP1Q14919 205 aaPredicted RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 ZYXQ15942 572 aaKnown RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 SNCBQ16143 134 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 QRICH1Q2TAL8 776 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 PALB2Q86YC2 1186 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 CEP89Q96ST8 783 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 NT5C3AQ9H0P0 336 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 GANQ9H2C0 597 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 ERVK-5Q9HDB9 667 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 ACSL3O95573 720 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 GDAP1Q8TB36 358 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 FBXO25Q8TCJ0 367 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 PSMD1Q99460 953 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 PRMT1Q99873 361 aaKnown RBP18.32■□□□□ 0.52
SGPP1-201ENST00000247225 FAM118BQ9BPY3 351 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 DNAJC12Q9UKB3 198 aa18.32■□□□□ 0.52
SGPP1-201ENST00000247225 SLC29A2Q14542 456 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 ZFYVE27Q5T4F4 411 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 DENND2CQ68D51 928 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 CPNE8Q86YQ8 564 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 KIF2BQ8N4N8 673 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 ARHGEF26Q96DR7 871 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 PBKQ96KB5 322 aa18.31■□□□□ 0.52
SGPP1-201ENST00000247225 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
SGPP1-201ENST00000247225 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms