RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 GLI1P08151 1106 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 GOLGA6DP0CG33 693 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 CASP4P49662 377 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 JAM2P57087 298 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 HSD17B14Q9BPX1 270 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 BCAS3Q9H6U6 928 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 TUFT1Q9NNX1 390 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 GOLGA6AQ9NYA3 693 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 NAGPAQ9UK23 515 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 PACSIN2Q9UNF0 486 aaPredicted RBP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 EIF3DO15371 548 aaKnown RBP eCLIP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 SHOX2O60902 331 aaPredicted RBP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 ICE2Q659A1 982 aa23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 RBBP6Q7Z6E9 1792 aaKnown RBP23.67■■□□□ 1.38
SH2D3A-201ENST00000245908 TGFB1I1O43294 461 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 OPA1O60313 960 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 CLSTN1O94985 981 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 HEXIM1O94992 359 aaKnown RBP23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 DNA2P51530 1060 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 SMCHD1A6NHR9 2005 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 TRAF1Q13077 416 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 NFIL3Q16649 462 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 IFI16Q16666 785 aaKnown RBP23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 TCERG1LQ5VWI1 586 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 BORCS6Q96GS4 357 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 WDR18Q9BV38 432 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 ZMYM2Q9UBW7 1377 aa23.66■■□□□ 1.38
SH2D3A-201ENST00000245908 KCNA1Q09470 495 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 PAK2Q13177 524 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 OTOP1Q7RTM1 612 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 USP38Q8NB14 1042 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 TAF4BQ92750 862 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 GCNT4Q9P109 453 aa23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 AJAP1Q9UKB5 411 aaPredicted RBP23.65■■□□□ 1.38
SH2D3A-201ENST00000245908 CLIC2O15247 247 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 HSF2BPO75031 334 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 FLOT1O75955 427 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 MAGEA9P43362 315 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 STAT2P52630 851 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 PPFIA1Q13136 1202 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 RPS6KA1Q15418 735 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 ALKBH5Q6P6C2 394 aaKnown RBP23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 FOXR1Q6PIV2 292 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 C1orf186Q6ZWK4 172 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 LRRC57Q8N9N7 239 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 GEMIN8Q9NWZ8 242 aaKnown RBP23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 TMEM59LQ9UK28 342 aa23.64■■□□□ 1.38
SH2D3A-201ENST00000245908 PSMD10O75832 226 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 SLITRK3O94933 977 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 FAM13AO94988 1023 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 KIF4AO95239 1232 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 CARSP49589 748 aaKnown RBP23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 PPP2R5CQ13362 524 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 CTTNQ14247 550 aaKnown RBP23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 SPICE1Q8N0Z3 855 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 FLAD1Q8NFF5 587 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 CSRNP1Q96S65 589 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 KRT12Q99456 494 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 EPB41L5Q9HCM4 733 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 POLD4Q9HCU8 107 aa23.64■■□□□ 1.37
SH2D3A-201ENST00000245908 POLD1P28340 1107 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 GUCY2DQ02846 1103 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 PIGOQ8TEQ8 1089 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 SLC5A5Q92911 643 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 DYDC2Q96IM9 177 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 GTF2A1P52655 376 aaPredicted RBP23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 TNNC1P63316 161 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 LRCH2Q5VUJ6 765 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 CC2D2BQ6DHV5 1058 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 PBKQ96KB5 322 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 PCDHB13Q9Y5F0 798 aa23.63■■□□□ 1.37
SH2D3A-201ENST00000245908 SFI1A8K8P3 1242 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 VPS36Q86VN1 386 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 MREGQ8N565 214 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 MYCT1Q8N699 235 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 PRMT6Q96LA8 375 aaPredicted RBP23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 RUFY1Q96T51 708 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 ARHGEF10LQ9HCE6 1279 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 HERC5Q9UII4 1024 aaKnown RBP23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 NFU1Q9UMS0 254 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 UBE4BO95155 1302 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 ZSCAN5CA6NGD5 496 aaPredicted RBP23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 PPFIA4O75335 1185 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 NMT1P30419 496 aaKnown RBP23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 PSMC2P35998 433 aaKnown RBP23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 TPH2Q8IWU9 490 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 FAM186BQ8IYM0 893 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 MKNK1Q9BUB5 465 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 INTUQ9ULD6 942 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 FRMPD4Q14CM0 1322 aa23.62■■□□□ 1.37
SH2D3A-201ENST00000245908 A0A0A6YYK5 440 aaPredicted RBP23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 KCNK3O14649 394 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 CFBP00751 764 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 FERP16591 822 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 MUTP22033 750 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 ECE1P42892 770 aa23.61■■□□□ 1.37
SH2D3A-201ENST00000245908 PRELPP51888 382 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms