RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SYN2Q92777 582 aaPredicted RBP13.98□□□□□ -0.17
SNAI1-201ENST00000244050 ATG4CQ96DT6 458 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 VAV3Q9UKW4 847 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 PTPRFP10586 1907 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 SSU72P8A0A1W2PR75 194 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 VWA5AO00534 786 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 NFIBO00712 420 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 ZNF263O14978 683 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 USO1O60763 962 aaKnown RBP13.98□□□□□ -0.17
SNAI1-201ENST00000244050 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
SNAI1-201ENST00000244050 HSD17B4P51659 736 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 SOX10P56693 466 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 UBXN2AP68543 259 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 FAM193AP78312 1265 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 RRAGAQ7L523 313 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
SNAI1-201ENST00000244050 UBXN6Q9BZV1 441 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 HOMER2Q9NSB8 354 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 CEP72Q9P209 647 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 SAR1BQ9Y6B6 198 aa13.98□□□□□ -0.17
SNAI1-201ENST00000244050 IGLV3-22A0A075B6J6 115 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 LRRC53A6NM62 1247 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 SEC31AO94979 1220 aaKnown RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 PLEKP08567 350 aaPredicted RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 EIF4A3P38919 411 aaKnown RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 KIF11P52732 1056 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 PSMC6P62333 389 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 ASTE1Q2TB18 679 aaPredicted RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 EPM2AIP1Q7L775 607 aaPredicted RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 CTU1Q7Z7A3 348 aaKnown RBP13.97□□□□□ -0.17
SNAI1-201ENST00000244050 NELFCDQ8IXH7 590 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 CLEC4DQ8WXI8 215 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 TFR2Q9UP52 801 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 PCDHA13Q9Y5I0 950 aa13.97□□□□□ -0.17
SNAI1-201ENST00000244050 CETN3O15182 167 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 EYA4O95677 639 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 DSG3P32926 999 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 ADAM9Q13443 819 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 COG2Q14746 738 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 TXLNBQ8N3L3 684 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 CYP2W1Q8TAV3 490 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 RPGRIP1Q96KN7 1286 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 FUT8Q9BYC5 575 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 RABGAP1Q9Y3P9 1069 aa13.96□□□□□ -0.17
SNAI1-201ENST00000244050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNAI1-201ENST00000244050 RBAK-RBAKDNI3L0D1 243 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 PJA2O43164 708 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 NOL4O94818 638 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TM4SF4P48230 202 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 KNOP1Q1ED39 458 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 BMT2Q1RMZ1 405 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TRIM58Q8NG06 486 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TRERF1Q96PN7 1200 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 REEP2Q9BRK0 252 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TUFT1Q9NNX1 390 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 MAP3K20Q9NYL2 800 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 EML1O00423 815 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 MEIS1O00470 390 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 PDXKO00764 312 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 ENC1O14682 589 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 MAP2K7O14733 419 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 AKR1B10O60218 316 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TACC1O75410 805 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 ERLIN1O75477 346 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 SASH3O75995 380 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TFRCP02786 760 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 PRLRP16471 622 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 MUTP22033 750 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 CKAP4Q07065 602 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 TERF2Q15554 542 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 HGSNATQ68CP4 663 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 OTOP1Q7RTM1 612 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 FRMD5Q7Z6J6 570 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
SNAI1-201ENST00000244050 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
SNAI1-201ENST00000244050 CCDC155Q8N6L0 562 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms