RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 FAF1Q9UNN5 650 aaPredicted RBP10.03□□□□□ -0.8
SRSF6-201ENST00000244020 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC55Q6ZSA7 311 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 TAOK1Q7L7X3 1001 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 TBC1D22AQ8WUA7 517 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 KIF9Q9HAQ2 790 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 TFCP2L1Q9NZI6 479 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 PPIP5K2O43314 1243 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 COPB2P35606 906 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 COASYQ13057 564 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 GRM4Q14833 912 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 EXOC3L4Q17RC7 722 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 MCUR1Q96AQ8 359 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 FAXDC2Q96IV6 333 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 C15orf41Q9Y2V0 281 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
SRSF6-201ENST00000244020 NR2F2P24468 414 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC14Q15048 493 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 RCSD1Q6JBY9 416 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC43Q8N309 656 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 KIF2BQ8N4N8 673 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 ECT2Q9H8V3 914 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 ARMCX3Q9UH62 379 aaPredicted RBP10.03□□□□□ -0.8
SRSF6-201ENST00000244020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
SRSF6-201ENST00000244020 CCDC189A1A4V9 331 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 NOL4O94818 638 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 SUN1O94901 812 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 USP17L2Q6R6M4 530 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 ANKRD42Q8N9B4 389 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 MMTAG2Q9BU76 263 aaKnown RBP10.02□□□□□ -0.8
SRSF6-201ENST00000244020 BLOC1S4Q9NUP1 217 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 NAGPAQ9UK23 515 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 TRPC6Q9Y210 931 aa10.02□□□□□ -0.8
SRSF6-201ENST00000244020 TJP1Q07157 1748 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 DDX60Q8IY21 1712 aaKnown RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 CHD4Q14839 1912 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 F8W031 263 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 SLC9A1P19634 815 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 PDE6CP51160 858 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 HSPA2P54652 639 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ARHGAP27Q6ZUM4 889 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ZNF571Q7Z3V5 609 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 LCA5Q86VQ0 697 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 TPCN2Q8NHX9 752 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 LZTS2Q9BRK4 669 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 HDAC9Q9UKV0 1011 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 PHRF1Q9P1Y6 1649 aaKnown RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 CYTH3O43739 400 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 SHBGP04278 402 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 CYP19A1P11511 503 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 XRCC5P13010 732 aaKnown RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ECHS1P30084 290 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 CCNHP51946 323 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ZNF211Q13398 564 aaPredicted RBP10.02□□□□□ -0.81
SRSF6-201ENST00000244020 SLC29A2Q14542 456 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 ITIH4Q14624 930 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 NUGGCQ68CJ6 796 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 AGAP11Q8TF27 550 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 GLG1Q92896 1179 aa10.02□□□□□ -0.81
SRSF6-201ENST00000244020 TMEM110-MUSTN1A8MSY1 372 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 CES2O00748 559 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 GSTA1P08263 222 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 PAEPP09466 180 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 IFI35P80217 286 aaPredicted RBP10.01□□□□□ -0.81
SRSF6-201ENST00000244020 SLMAPQ14BN4 828 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
SRSF6-201ENST00000244020 SH2D4BQ5SQS7 431 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 DAGLBQ8NCG7 672 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 PIGSQ96S52 555 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 VCX3BQ9H321 246 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 MLXIPLQ9NP71 852 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.01□□□□□ -0.816e-18■■□□□ 12.5
SRSF6-201ENST00000244020 AIPL1Q9NZN9 384 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 TMEM59LQ9UK28 342 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 ADAMTS7Q9UKP4 1686 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
SRSF6-201ENST00000244020 RASGRF2O14827 1237 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 ASAP2O43150 1006 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 UBOX5O94941 541 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 TDP2O95551 362 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 PRDX5P30044 214 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 CRELD2Q6UXH1 353 aaPredicted RBP10.01□□□□□ -0.81
SRSF6-201ENST00000244020 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
SRSF6-201ENST00000244020 TMEM47Q9BQJ4 181 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 ABCF3Q9NUQ8 709 aa10.01□□□□□ -0.81
SRSF6-201ENST00000244020 GFPT2O94808 682 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms