RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 CKAP2LQ8IYA6 745 aa17.42■□□□□ 0.38
RAB38-201ENST00000243662 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
RAB38-201ENST00000243662 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
RAB38-201ENST00000243662 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
RAB38-201ENST00000243662 NIFKQ9BYG3 293 aaKnown RBP17.42■□□□□ 0.38
RAB38-201ENST00000243662 RRAGDQ9NQL2 400 aaPredicted RBP17.42■□□□□ 0.38
RAB38-201ENST00000243662 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
RAB38-201ENST00000243662 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
RAB38-201ENST00000243662 NR2E3Q9Y5X4 410 aa17.42■□□□□ 0.38
RAB38-201ENST00000243662 SCN5AQ14524 2016 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB38-201ENST00000243662 MED24O75448 989 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 ITGB8P26012 769 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 RPA1P27694 616 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 GRIN1Q05586 938 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 TRIM71Q2Q1W2 868 aaKnown RBP17.41■□□□□ 0.38
RAB38-201ENST00000243662 ZNF484Q5JVG2 852 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 ANO5Q75V66 913 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 CATSPER3Q86XQ3 398 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 TRAPPC12Q8WVT3 735 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 WNT8BQ93098 351 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 MMTAG2Q9BU76 263 aaKnown RBP17.41■□□□□ 0.38
RAB38-201ENST00000243662 NOC4LQ9BVI4 516 aaKnown RBP17.41■□□□□ 0.38
RAB38-201ENST00000243662 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 TUFT1Q9NNX1 390 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 NRBP2Q9NSY0 501 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
RAB38-201ENST00000243662 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
RAB38-201ENST00000243662 TMEM150BA6NC51 233 aa17.4■□□□□ 0.38
RAB38-201ENST00000243662 PP2D1A8MPX8 630 aa17.4■□□□□ 0.38
RAB38-201ENST00000243662 YEATS4O95619 227 aa17.4■□□□□ 0.38
RAB38-201ENST00000243662 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
RAB38-201ENST00000243662 TPH2Q8IWU9 490 aa17.4■□□□□ 0.38
RAB38-201ENST00000243662 ERMNQ8TAM6 284 aa17.4■□□□□ 0.38
RAB38-201ENST00000243662 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
RAB38-201ENST00000243662 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
RAB38-201ENST00000243662 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 SYN1P17600 705 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 MUTP22033 750 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 IGBP1P78318 339 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 ECM1Q16610 540 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 MTHFD1LQ6UB35 978 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
RAB38-201ENST00000243662 ZBTB10Q96DT7 871 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 HIPK3Q9H422 1215 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 PRDM5Q9NQX1 630 aaPredicted RBP17.39■□□□□ 0.37
RAB38-201ENST00000243662 PCDH10Q9P2E7 1040 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 NOD1Q9Y239 953 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
RAB38-201ENST00000243662 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
RAB38-201ENST00000243662 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 ZBTB39O15060 712 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 C22orf31O95567 290 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 TIMP1P01033 207 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 KLRC1P26715 233 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
RAB38-201ENST00000243662 CDC25AP30304 524 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
RAB38-201ENST00000243662 HAUS3Q68CZ6 603 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 RUFY4Q6ZNE9 571 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 RPAINQ86UA6 219 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 AK8Q96MA6 479 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
RAB38-201ENST00000243662 CFAP45Q9UL16 551 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
RAB38-201ENST00000243662 H0YGN5 161 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 PPP6R2O75170 966 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 LONP1P36776 959 aaKnown RBP17.37■□□□□ 0.37
RAB38-201ENST00000243662 HYIQ5T013 277 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 PLA2G4FQ68DD2 849 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 TAF2Q6P1X5 1199 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 ZSCAN30Q86W11 494 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 LINC01465Q8N7H1 131 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 TET1Q8NFU7 2136 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 SPATA32Q96LK8 384 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 WNT8AQ9H1J5 351 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 PRKAG2Q9UGJ0 569 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 SPTLC2O15270 562 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 CKBP12277 381 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 RAG1P15918 1043 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 CYP2C18P33260 490 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 CCT6AP40227 531 aaKnown RBP17.37■□□□□ 0.37
RAB38-201ENST00000243662 NPEPPSP55786 919 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 BFSP2Q13515 415 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 STK38Q15208 465 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 MTERF2Q49AM1 385 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 TRAF7Q6Q0C0 670 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 ZNF579Q8NAF0 562 aaKnown RBP17.37■□□□□ 0.37
RAB38-201ENST00000243662 SH2D3AQ9BRG2 576 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 PPP1R12CQ9BZL4 782 aa17.37■□□□□ 0.37
RAB38-201ENST00000243662 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms