RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 POTECB2RU33 542 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 PLA2G4BP0C869 781 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 PSMC6P62333 389 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEBQ6S5H4 581 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 NLRP14Q86W24 1093 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 TSG101Q99816 390 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 TMCO5BA8MYB1 307 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 SORBS3O60504 671 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 SHMT1P34896 483 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 CFAP58Q5T655 872 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 NT5DC3Q86UY8 548 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 IFT81Q8WYA0 676 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 MYO3BQ8WXR4 1341 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 MEIS2O14770 477 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 ITGA4P13612 1032 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 QPCTQ16769 361 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 SLX4Q8IY92 1834 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 AKAP3O75969 853 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 LDHCP07864 332 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 PPATQ06203 517 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 CUL1Q13616 776 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 PBKQ96KB5 322 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 A1CFQ9NQ94 594 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 KIAA1024Q9UPX6 916 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
SEC61A1-201ENST00000243253 KDM3AQ9Y4C1 1321 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.323e-15■■■■■ 28.1
SEC61A1-201ENST00000243253 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 TMC3Q7Z5M5 1100 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 SART1O43290 800 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 NPEPPSP55786 919 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ACTN3Q08043 901 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ADAM9Q13443 819 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 B4GALNT4Q76KP1 1039 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ADAT2Q7Z6V5 191 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 SLC35C1Q96A29 364 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 USP40Q9NVE5 1235 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 SUCLA2Q9P2R7 463 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 RGPD3A6NKT7 1758 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 RGPD4Q7Z3J3 1758 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ZBTB5O15062 677 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 INPP5BP32019 993 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 RAPGEF1Q13905 1077 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 C3orf20Q8ND61 904 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.322e-9■□□□□ 9
SEC61A1-201ENST00000243253 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ZDHHC18Q9NUE0 388 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 PCDHA3Q9Y5H8 950 aa13.06□□□□□ -0.32
SEC61A1-201ENST00000243253 ANXA13P27216 316 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 ZNF76P36508 570 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 SYT2Q8N9I0 419 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 MYH11P35749 1972 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 SERPINB2P05120 415 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 ASIC2Q16515 512 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 SIAH1Q8IUQ4 282 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 GEMIN8Q9NWZ8 242 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms