RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 METAP2P50579 478 aaKnown RBP eCLIP9□□□□□ -0.97
CXCR4-201ENST00000241393 RCAN1P53805 252 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 RBM6P78332 1123 aaKnown RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 CEBPZQ03701 1054 aaKnown RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 MAP3K12Q12852 859 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 CHAF1AQ13111 956 aaPredicted RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 ANO1Q5XXA6 986 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SYNE3Q6ZMZ3 975 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SLC51AQ86UW1 340 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 TOP6BLQ8N6T0 577 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 JMYQ8N9B5 988 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SPC24Q8NBT2 197 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF669Q96BR6 464 aaPredicted RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 TIGD1Q96MW7 591 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 ST7Q9NRC1 585 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 PYCARDQ9ULZ3 195 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 THRAP3Q9Y2W1 955 aaKnown RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 DOCK2Q92608 1830 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 PNPLA7Q6ZV29 1317 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 FAM237AA0A1B0GTK4 181 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 BECN2A8MW95 431 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 AGRPO00253 132 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 PPP6R2O75170 966 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 IDH1O75874 414 aaKnown RBP9□□□□□ -0.97
CXCR4-201ENST00000241393 PTGS1P23219 599 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 GUCY1B3Q02153 619 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 RASGRF1Q13972 1273 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 APOA5Q6Q788 366 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SEZ6L2Q6UXD5 910 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 CCDC186Q7Z3E2 898 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 TBC1D10CQ8IV04 446 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 DRC7Q8IY82 874 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SYNE4Q8N205 404 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 SPATA5Q8NB90 893 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 RNF141Q8WVD5 230 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 KRT23Q9C075 422 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 FTOQ9C0B1 505 aaKnown RBP eCLIP9□□□□□ -0.97
CXCR4-201ENST00000241393 CLIP2Q9UDT6 1046 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 KCNH3Q9ULD8 1083 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 COL16A1Q07092 1604 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 IQCA1LA6NCM1 817 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 PDPK1O15530 556 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 ZBTB43O43298 467 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 UBOX5O94941 541 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 POLR2BP30876 1174 aaKnown RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 CDK5R2Q13319 367 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 SLC39A14Q15043 492 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 TCEAL1Q15170 157 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 CCDC152Q4G0S7 254 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 C11orf57Q6ZUT1 292 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 CCDC144CPQ8IYA2 1237 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 ST13P5Q8NFI4 369 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 IGDCC4Q8TDY8 1250 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 WASF1Q92558 559 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 PSMG3-AS1Q96PY0 264 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 SDF4Q9BRK5 362 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 MKRN2Q9H000 416 aaKnown RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 GBP3Q9H0R5 595 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 PRDM5Q9NQX1 630 aaPredicted RBP8.99□□□□□ -0.97
CXCR4-201ENST00000241393 LAMB2P55268 1798 aa8.99□□□□□ -0.97
CXCR4-201ENST00000241393 FAM86C2PA6NEL3 165 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 APPP05067 770 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 U2AF2P26368 475 aaKnown RBP eCLIP8.98□□□□□ -0.97
CXCR4-201ENST00000241393 KIR3DL1P43629 444 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 GSDMDP57764 484 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 TRIM29Q14134 588 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
CXCR4-201ENST00000241393 AXDND1Q5T1B0 1012 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-201ENST00000241393 KIAA1211LQ6NV74 962 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 C6orf15Q6UXA7 325 aaPredicted RBP8.98□□□□□ -0.97
CXCR4-201ENST00000241393 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 CYB5R4Q7L1T6 521 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
CXCR4-201ENST00000241393 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 DNAJB8Q8NHS0 232 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 KREMEN1Q96MU8 473 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 MPHOSPH8Q99549 860 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 DUSP23Q9BVJ7 150 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 NAPBQ9H115 298 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 LY9Q9HBG7 655 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 KCND1Q9NSA2 647 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 IMPACTQ9P2X3 320 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 MSRB2Q9Y3D2 182 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 CLIC4Q9Y696 253 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 DOT1LQ8TEK3 1739 aa8.98□□□□□ -0.97
CXCR4-201ENST00000241393 CCDC85CA6NKD9 419 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 MYO1BO43795 1136 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SLITRK5O94991 958 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 GJB6O95452 261 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 FAM87AP0C7U9 286 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 IGHMBP2P38935 993 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms