RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GIMAP4Q9NUV9 329 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 DRD4P21917 467 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 BTKQ06187 659 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 STKLD1Q8NE28 680 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 METTL14Q9HCE5 456 aaKnown RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 DBR1Q9UK59 544 aaKnown RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 PCDHB6Q9Y5E3 794 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 NUP107P57740 925 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 USP46P62068 366 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 KYNUQ16719 465 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 MREGQ8N565 214 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 ERMNQ8TAM6 284 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 FNBP1Q96RU3 617 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 ASCC2Q9H1I8 757 aaPredicted RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 ABCF3Q9NUQ8 709 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 E9PCH4 1651 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 MAGI3Q5TCQ9 1506 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ATXN2LQ8WWM7 1075 aaKnown RBP13.8□□□□□ -0.2
VAMP4-201ENST00000236192 SUCLG2Q96I99 432 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 BLOC1S6Q9UL45 172 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF844Q08AG5 666 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 DYMQ7RTS9 669 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 CCT6BQ92526 530 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
VAMP4-201ENST00000236192 KLHL25Q9H0H3 589 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 MROH7-TTC4A0A0A0MT08 1334 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 GLI1P08151 1106 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 KRT5P13647 590 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ATG16L1Q676U5 607 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 INPP5DQ92835 1189 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 DNAJC7Q99615 494 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 TXNDC16Q9P2K2 825 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
VAMP4-201ENST00000236192 PLS3P13797 630 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 KCNA4P22459 653 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ATICP31939 592 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 CHRNA3P32297 505 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF76P36508 570 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 CAV1Q03135 178 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 NDUFA5Q16718 116 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 SIX5Q8N196 739 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 CCT7Q99832 543 aa13.8□□□□□ -0.2
VAMP4-201ENST00000236192 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 KIF28PB7ZC32 967 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 TTI1O43156 1089 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 HOXB7P09629 217 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ATP6V1B1P15313 513 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 FGFR4P22455 802 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 HERVK_113P62684 666 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 CYTH1Q15438 398 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ANKRD13DQ6ZTN6 518 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 TRMT10CQ7L0Y3 403 aaKnown RBP13.79□□□□□ -0.2
VAMP4-201ENST00000236192 MAGEB18Q96M61 343 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 UBN1Q9NPG3 1134 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 CEP72Q9P209 647 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 IPO5O00410 1097 aaKnown RBP13.79□□□□□ -0.2
VAMP4-201ENST00000236192 SERPINI2O75830 405 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 KRT38O76015 456 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 CCDC153Q494R4 210 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 USH1GQ495M9 461 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 KCTD21Q4G0X4 260 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 TRIM67Q6ZTA4 783 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 MTBPQ96DY7 904 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 FHDC1Q9C0D6 1143 aaPredicted RBP13.79□□□□□ -0.2
VAMP4-201ENST00000236192 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ATAD3AQ9NVI7 634 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 ARHGEF9O43307 516 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 SLC5A1P13866 664 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 NAPAP54920 295 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 C16orf72Q14CZ0 275 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
VAMP4-201ENST00000236192 PDZD8Q8NEN9 1154 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 SH3GL1Q99961 368 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms