RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GDAP1L1Q96MZ0 367 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 EML1O00423 815 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 WDR46O15213 610 aaKnown RBP24.33■■□□□ 1.49
CCDC9-201ENST00000221922 PSMD10O75832 226 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 ICAM1P05362 532 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 PPP2R5CQ13362 524 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 TDRD12Q587J7 1177 aaKnown RBP24.33■■□□□ 1.49
CCDC9-201ENST00000221922 LRCH2Q5VUJ6 765 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 OTOP1Q7RTM1 612 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 HDAC7Q8WUI4 952 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 NOX5Q96PH1 765 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 TLR10Q9BXR5 811 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 NLRC4Q9NPP4 1024 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 DMGDHQ9UI17 866 aaKnown RBP24.33■■□□□ 1.49
CCDC9-201ENST00000221922 LOXHD1Q8IVV2 1947 aa24.33■■□□□ 1.49
CCDC9-201ENST00000221922 RPL13P26373 211 aaKnown RBP24.33■■□□□ 1.48
CCDC9-201ENST00000221922 LRRC31Q6UY01 552 aa24.33■■□□□ 1.48
CCDC9-201ENST00000221922 HSD17B14Q9BPX1 270 aa24.33■■□□□ 1.48
CCDC9-201ENST00000221922 KIAA1683Q9H0B3 1180 aa24.33■■□□□ 1.48
CCDC9-201ENST00000221922 OLFML3Q9NRN5 406 aa24.33■■□□□ 1.48
CCDC9-201ENST00000221922 TYW1Q9NV66 732 aaKnown RBP24.33■■□□□ 1.48
CCDC9-201ENST00000221922 ARMCX3Q9UH62 379 aaPredicted RBP24.33■■□□□ 1.48
CCDC9-201ENST00000221922 TSKSQ9UJT2 592 aa24.33■■□□□ 1.48
CCDC9-201ENST00000221922 A0A0U1RQG5 324 aaPredicted RBP24.32■■□□□ 1.48
CCDC9-201ENST00000221922 INPP5BP32019 993 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 POLR2FP61218 127 aaKnown RBP24.32■■□□□ 1.48
CCDC9-201ENST00000221922 KCNH2Q12809 1159 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 CEP55Q53EZ4 464 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 KLHDC7AQ5VTJ3 777 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 TRERF1Q96PN7 1200 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 RUSC1Q9BVN2 902 aa24.32■■□□□ 1.48
CCDC9-201ENST00000221922 TLR2O60603 784 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 EGFRP00533 1210 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 HSD17B4P51659 736 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 SETQ01105 290 aaPredicted RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 RASSF7Q02833 373 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 PRPF38AQ8NAV1 312 aaKnown RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 RIN2Q8WYP3 895 aaPredicted RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 METTL14Q9HCE5 456 aaKnown RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 RGL1Q9NZL6 768 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 GOLGA6BA6NDN3 693 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 SLC16A3O15427 465 aaKnown RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 CTNND1O60716 968 aaKnown RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 TNFRSF8P28908 595 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 PRELPP51888 382 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 SRLQ86TD4 932 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 CCDC125Q86Z20 511 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 WDR11Q9BZH6 1224 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 FEZ2Q9UHY8 353 aaPredicted RBP24.31■■□□□ 1.48
CCDC9-201ENST00000221922 CCPG1Q9ULG6 757 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 ZNF536O15090 1300 aa24.31■■□□□ 1.48
CCDC9-201ENST00000221922 MYBP10242 640 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 PAFAH1B1P43034 410 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 GHRHRQ02643 423 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 SLC20A2Q08357 652 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 CCDC181Q5TID7 509 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 RINT1Q6NUQ1 792 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 ANKRD13CQ8N6S4 541 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 RNF14Q9UBS8 474 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 EIF3DO15371 548 aaKnown RBP eCLIP24.3■■□□□ 1.48
CCDC9-201ENST00000221922 GAS7O60861 476 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 AFPP02771 609 aaKnown RBP24.3■■□□□ 1.48
CCDC9-201ENST00000221922 CXCR5P32302 372 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 HOXD13P35453 343 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 GANQ9H2C0 597 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 PLCB1Q9NQ66 1216 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 AIPL1Q9NZN9 384 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 STIM2Q9P246 746 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 LCMT1Q9UIC8 334 aa24.3■■□□□ 1.48
CCDC9-201ENST00000221922 NCK2O43639 380 aa24.29■■□□□ 1.48
CCDC9-201ENST00000221922 FAM13AO94988 1023 aa24.29■■□□□ 1.48
CCDC9-201ENST00000221922 GCNT3O95395 438 aa24.29■■□□□ 1.48
CCDC9-201ENST00000221922 GMPSP49915 693 aaPredicted RBP24.29■■□□□ 1.48
CCDC9-201ENST00000221922 GLE1Q53GS7 698 aaKnown RBP24.29■■□□□ 1.48
CCDC9-201ENST00000221922 MICALL2Q8IY33 904 aa24.29■■□□□ 1.48
CCDC9-201ENST00000221922 SCAF8Q9UPN6 1271 aaKnown RBP24.29■■□□□ 1.48
CCDC9-201ENST00000221922 RPTORQ8N122 1335 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 RSPH10B2B2RC85 870 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 MYO1CO00159 1063 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SHOX2O60902 331 aaPredicted RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SLITRK3O94933 977 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 NR3C1P04150 777 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 RSPH10BP0C881 870 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 EPB41P11171 864 aaKnown RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 XRCC5P13010 732 aaKnown RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 CTTNQ14247 550 aaKnown RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 EMBQ6PCB8 327 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SAMD1Q6SPF0 538 aaPredicted RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SND1Q7KZF4 910 aaKnown RBP eCLIP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 TPH2Q8IWU9 490 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 DYDC2Q96IM9 177 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 AGBL1Q96MI9 1066 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 RRP15Q9Y3B9 282 aaKnown RBP24.28■■□□□ 1.48
CCDC9-201ENST00000221922 CD2APQ9Y5K6 639 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 EPHB4P54760 987 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 RAPGEF1Q13905 1077 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 NAB2Q15742 525 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 FOXR1Q6PIV2 292 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 GPIHBP1Q8IV16 184 aa24.28■■□□□ 1.48
CCDC9-201ENST00000221922 SH3GL2Q99962 352 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms