RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PTPN21Q16825 1174 aa10.25□□□□□ -0.77
CCDC113-201ENST00000219299 SLC9C1Q4G0N8 1177 aa10.25□□□□□ -0.77
CCDC113-201ENST00000219299 PPFIBP2Q8ND30 876 aa10.25□□□□□ -0.77
CCDC113-201ENST00000219299 FAM193BQ96PV7 902 aaPredicted RBP10.25□□□□□ -0.77
CCDC113-201ENST00000219299 MYCBPQ99417 103 aaPredicted RBP10.25□□□□□ -0.77
CCDC113-201ENST00000219299 LSM14BQ9BX40 385 aaKnown RBP10.25□□□□□ -0.77
CCDC113-201ENST00000219299 SAMSN1Q9NSI8 373 aaKnown RBP10.25□□□□□ -0.77
CCDC113-201ENST00000219299 STIM2Q9P246 746 aa10.25□□□□□ -0.77
CCDC113-201ENST00000219299 NUB1Q9Y5A7 615 aa10.25□□□□□ -0.77
CCDC113-201ENST00000219299 TBX3O15119 743 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 ACTN2P35609 894 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 ADKP55263 362 aaKnown RBP10.24□□□□□ -0.77
CCDC113-201ENST00000219299 KLHL30Q0D2K2 578 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 PSMD2Q13200 908 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 SETDB1Q15047 1291 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 MAPK6Q16659 721 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 VWA3BQ502W6 1294 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 KCNH4Q9UQ05 1017 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 CICQ96RK0 1608 aaPredicted RBP10.24□□□□□ -0.77
CCDC113-201ENST00000219299 MAFGO15525 162 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 YWHABP31946 246 aaKnown RBP10.24□□□□□ -0.77
CCDC113-201ENST00000219299 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 PPIL2Q13356 520 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 TRIM14Q14142 442 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 LMNTD2Q8IXW0 634 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 IFT81Q8WYA0 676 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 PDCD2LQ9BRP1 358 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 PSMC2P35998 433 aaKnown RBP10.24□□□□□ -0.77
CCDC113-201ENST00000219299 ASIC2Q16515 512 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 MSH4O15457 936 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 GH1P01241 217 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 PRR29P0C7W0 189 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 ARP10275 920 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 DEFB115Q30KQ5 88 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 SMC6Q96SB8 1091 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 RIT2Q99578 217 aa10.24□□□□□ -0.77
CCDC113-201ENST00000219299 COL18A1P39060 1754 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 DENND3A2RUS2 1198 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 FOXP2O15409 715 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 ARHGAP6O43182 974 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 MXRA7P84157 204 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 XKR3Q5GH77 459 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 CCDC122Q5T0U0 273 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 GPR161Q8N6U8 529 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 CYP2W1Q8TAV3 490 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 WDR18Q9BV38 432 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 C1orf112Q9NSG2 853 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 MAPK4P31152 587 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 COPB1P53618 953 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 CNTN2Q02246 1040 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 BRD3Q15059 726 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 DAGLBQ8NCG7 672 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 MTRQ99707 1265 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 PAIP2Q9BPZ3 127 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 AGTPBP1Q9UPW5 1226 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 NPEPPSP55786 919 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 ATP11AP98196 1134 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 EXOC3L4Q17RC7 722 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 XRRA1Q6P2D8 792 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 PPP1R14CQ8TAE6 165 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 PVALEFA0A1B0GWK0 134 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 EYA4O95677 639 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 SREBF1P36956 1147 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 RGS2P41220 211 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 STAT1P42224 750 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 COASYQ13057 564 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 PLA2G4FQ68DD2 849 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 ENOX1Q8TC92 643 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 ST7Q9NRC1 585 aa10.23□□□□□ -0.77
CCDC113-201ENST00000219299 MTRF1LQ9UGC7 380 aaKnown RBP10.23□□□□□ -0.77
CCDC113-201ENST00000219299 CLGNO14967 610 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 YBX3P16989 372 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 ZBTB16Q05516 673 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 KDM3BQ7LBC6 1761 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 CLDN3O15551 220 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 P4HA1P13674 534 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 PPFIA1Q13136 1202 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 SFMBT2Q5VUG0 894 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 OR8K1Q8NGG5 319 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 MSTO1Q9BUK6 570 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 MOV10L1Q9BXT6 1211 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TRIM9Q9C026 710 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 SLC38A10Q9HBR0 1119 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 A1CFQ9NQ94 594 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TRIM49BA6NDI0 452 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms