RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 IMPG1Q17R60 797 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ADCK5Q3MIX3 580 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 EDEM3Q9BZQ6 932 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 RWDD4Q6NW29 188 aaKnown RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 USP44Q9H0E7 712 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 KAT6BQ8WYB5 2073 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 TTLL1O95922 423 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 OSTNP61366 133 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 NDUFAF2Q8N183 169 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ICA1LQ8NDH6 482 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ZNF212Q9UDV6 495 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 PSMC1P62191 440 aaKnown RBP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 DPP9Q86TI2 863 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 SNX24Q9Y343 169 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 CCDC195A0A1B0GUA6 201 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 EFTUD2Q15029 972 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 TERF2Q15554 542 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 KLHL38Q2WGJ6 581 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ALKBH5Q6P6C2 394 aaKnown RBP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 ARHGAP18Q8N392 663 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 DDX28Q9NUL7 540 aaKnown RBP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 A2MP01023 1474 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 FAM95CA0A1B0GW59 222 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 BNIP3LO60238 219 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 Q3C1V9 767 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 MMTAG2Q9BU76 263 aaKnown RBP18.38■□□□□ 0.53
ITGB4-201ENST00000200181 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 FBXW4P57775 412 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 KIAA1841Q6NSI8 718 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
ITGB4-201ENST00000200181 TMCC1O94876 653 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 MTRQ99707 1265 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 OSBPL1AQ9BXW6 950 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 NDE1Q9NXR1 346 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 FAM161BQ96MY7 647 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 VPS11Q9H270 941 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 ADA2Q9NZK5 511 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 M0R2C6 588 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 KDM1AO60341 852 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 EFCAB14O75071 495 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 MFAP3LO75121 409 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 NFKBIAP25963 317 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 PTK2BQ14289 1009 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 USP6NLQ92738 828 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 ECT2Q9H8V3 914 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 ZMYM3Q14202 1370 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 PALMO75781 387 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 MTERF2Q49AM1 385 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 PIGSQ96S52 555 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 ASPSCR1Q9BZE9 553 aa18.37■□□□□ 0.53
ITGB4-201ENST00000200181 PLCG1P19174 1290 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 LRRC63Q05C16 580 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 ZMYM1Q5SVZ6 1142 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 KIAA2013Q8IYS2 634 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 TAGAPQ8N103 731 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 TRIM45Q9H8W5 580 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 RPF1Q9H9Y2 349 aaKnown RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 APOA1P02647 267 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 RBM41Q96IZ5 413 aaKnown RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 HNRNPCP07910 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 ALCAMQ13740 583 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 CATSPER3Q86XQ3 398 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 SLC26A7Q8TE54 656 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 DBNLQ9UJU6 430 aaKnown RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 SEMA3EO15041 775 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 KRT8P05787 483 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 DCPSQ96C86 337 aaKnown RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 KLHL8Q9P2G9 620 aaPredicted RBP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 GGCXP38435 758 aa18.36■□□□□ 0.53
ITGB4-201ENST00000200181 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
ITGB4-201ENST00000200181 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 OCM2P0CE71 109 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 OCMP0CE72 109 aaPredicted RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 SKOR1P84550 965 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 MECOMQ03112 1051 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 CAV1Q03135 178 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 ADD3Q9UEY8 706 aaKnown RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 ARHGAP26Q9UNA1 814 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 SRPRBQ9Y5M8 271 aaKnown RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 MAGOHP61326 146 aaKnown RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 CCNA1P78396 465 aa18.35■□□□□ 0.53
ITGB4-201ENST00000200181 PATL1Q86TB9 770 aaKnown RBP18.35■□□□□ 0.53
ITGB4-201ENST00000200181 ZNF229Q9UJW7 825 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms