RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CCDC197Q8NCU1 140 aa18.22■□□□□ 0.51
CTDP1-201ENST00000075430 EPS8L3Q8TE67 593 aaKnown RBP18.22■□□□□ 0.51
CTDP1-201ENST00000075430 PIGOQ8TEQ8 1089 aa18.22■□□□□ 0.51
CTDP1-201ENST00000075430 CUEDC2Q9H467 287 aa18.22■□□□□ 0.51
CTDP1-201ENST00000075430 PKD2L1Q9P0L9 805 aa18.22■□□□□ 0.51
CTDP1-201ENST00000075430 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
CTDP1-201ENST00000075430 ERFP50548 548 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 SLC29A2Q14542 456 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 CTNNBL1Q8WYA6 563 aaPredicted RBP18.21■□□□□ 0.51
CTDP1-201ENST00000075430 SGSM3Q96HU1 749 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 SH2D3AQ9BRG2 576 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 SAMD15Q9P1V8 674 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 NID2Q14112 1375 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 ATMINO43313 823 aaPredicted RBP18.21■□□□□ 0.51
CTDP1-201ENST00000075430 TRAPPC3O43617 180 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 LDHCP07864 332 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 TRIM49P0CI25 452 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 TRIM49CP0CI26 452 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 MYBP10242 640 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 FAM228AQ86W67 206 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 SFR1Q86XK3 245 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 FBXO25Q8TCJ0 367 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 FAM118BQ9BPY3 351 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 TRIM33Q9UPN9 1127 aa18.21■□□□□ 0.51
CTDP1-201ENST00000075430 A8MUI8 341 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 HSPA9P38646 679 aaKnown RBP18.2■□□□□ 0.5
CTDP1-201ENST00000075430 GALCP54803 685 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 DENND2CQ68D51 928 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.53e-6■■■■□ 22.2
CTDP1-201ENST00000075430 SPEF2Q9C093 1822 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 HNRNPH3P31942 346 aaKnown RBP18.2■□□□□ 0.5
CTDP1-201ENST00000075430 GJC1P36383 396 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 DOK7Q18PE1 504 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 SCFD1Q8WVM8 642 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 SEMA4AQ9H3S1 761 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 PPP1R9AQ9ULJ8 1098 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
CTDP1-201ENST00000075430 PALM3A6NDB9 673 aaPredicted RBP18.2■□□□□ 0.5
CTDP1-201ENST00000075430 PJA2O43164 708 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 FLOT1O75955 427 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 TCP10Q12799 353 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 ANKS4BQ8N8V4 417 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 CHMP6Q96FZ7 201 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 SH3GLB2Q9NR46 395 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 ABCF3Q9NUQ8 709 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 DAAM1Q9Y4D1 1078 aa18.2■□□□□ 0.5
CTDP1-201ENST00000075430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 M0R2N6 131 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 LAD1O00515 517 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 MESDQ14696 234 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 HP1BP3Q5SSJ5 553 aaPredicted RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 XPO6Q96QU8 1125 aaKnown RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 NOD2Q9HC29 1040 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 PLCB1Q9NQ66 1216 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 CHD4Q14839 1912 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 USP17L10C9JJH3 530 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 TRIM37O94972 964 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 USP11P51784 963 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 NAIF1Q69YI7 327 aaPredicted RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 NSMFQ6X4W1 530 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 C18orf8Q96DM3 657 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 ACP6Q9NPH0 428 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 CTTNBP2NLQ9P2B4 639 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 CREB1P16220 341 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 PRPHP41219 470 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 GSCP56915 257 aaPredicted RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 DR1Q01658 176 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 ZFYVE27Q5T4F4 411 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 TPCN2Q8NHX9 752 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 BTBD6Q96KE9 485 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 POP1Q99575 1024 aaKnown RBP18.19■□□□□ 0.5
CTDP1-201ENST00000075430 TAF1P21675 1872 aa18.19■□□□□ 0.5
CTDP1-201ENST00000075430 RASSF9O75901 435 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 KCNJ2P63252 427 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 FAM47EQ6ZV65 393 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 TAS2R14Q9NYV8 317 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 USP21Q9UK80 565 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 PVALEFA0A1B0GWK0 134 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ENO4A6NNW6 628 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 A6NNZ2 444 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ZBTB39O15060 712 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 DIAPH2O60879 1101 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 TUBB8Q3ZCM7 444 aa18.18■□□□□ 0.5
CTDP1-201ENST00000075430 ZC2HC1CQ53FD0 456 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms