RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 UBE2SQ16763 222 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 NLRP14Q86W24 1093 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 LONP2Q86WA8 852 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 CA8P35219 290 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 KIFC2Q96AC6 838 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 CHP1Q99653 195 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 HDAC6Q9UBN7 1215 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 CHRNA5P30532 468 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 LRRC63Q05C16 580 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 COG1Q8WTW3 980 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
TSPAN9-201ENST00000011898 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 PPIP5K2O43314 1243 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 MYBL1P10243 752 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 STAG2Q8N3U4 1231 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 POTEMA6NI47 508 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 KRT15P19012 456 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 MEIS1O00470 390 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 GPSM2P81274 684 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 UAP1Q16222 522 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 CCDC93Q567U6 631 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 SH2D3CQ8N5H7 860 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 SLC40A1Q9NP59 571 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
TSPAN9-201ENST00000011898 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 TGFB2P61812 414 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 DEUP1Q05D60 604 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 NFU1Q9UMS0 254 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 LAMB2P55268 1798 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 TULP2O00295 520 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 ORC4O43929 436 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 FGFR2P21802 821 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 MSH2P43246 934 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 CXorf38Q8TB03 319 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 CLIC2O15247 247 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 DPYDQ12882 1025 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 ZNF449Q6P9G9 518 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 CENPKQ9BS16 269 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 ETAA1Q9NY74 926 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 HPSEQ9Y251 543 aa13.11□□□□□ -0.31
TSPAN9-201ENST00000011898 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 HMGB1P1B2RPK0 211 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 NT5C2P49902 561 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 ADCY1Q08828 1119 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 SEPT2Q15019 361 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 B4GALNT2Q8NHY0 566 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 EXOC7Q9UPT5 735 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 H3BQF6 201 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 PPP1R37O75864 691 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 RNF8O76064 485 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 NCAPHQ15003 741 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 LIMA1Q9UHB6 759 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-201ENST00000011898 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms