RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 CCDC26Q8TAB7 109 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 MDM1Q8TC05 714 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 LRRC4CQ9HCJ2 640 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 PNMA6FA0A0J9YX94 578 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 GNPATO15228 680 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 CLIC2O15247 247 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 TRAPPC3O43617 180 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 MED24O75448 989 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 GFPT2O94808 682 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 COPB2P35606 906 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SMTNP53814 917 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 MTMR3Q13615 1198 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 C6orf89Q6UWU4 347 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 VPS36Q86VN1 386 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SEC16BQ96JE7 1060 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 AJAP1Q9UKB5 411 aaPredicted RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 UTP11Q9Y3A2 253 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 IRS2Q9Y4H2 1338 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SMIM23A6NLE4 172 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 ABCB4P21439 1286 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 CEP57Q86XR8 500 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 CACNA2D3Q8IZS8 1091 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 LMBR1Q8WVP7 490 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 OSBPL7Q9BZF2 842 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 LEMD3Q9Y2U8 911 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SPATA31A1Q5TZJ5 1347 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 TLDC2A0PJX2 215 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 F8W031 263 aaPredicted RBP11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CCDC188H7C350 402 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CES2O00748 559 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CHUKO15111 745 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 FGGP02679 453 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 PSMC6P62333 389 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 ARSHQ5FYA8 562 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 MFSD14BQ5SR56 506 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 TMC3Q7Z5M5 1100 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 DNM1LO00429 736 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 UFL1O94874 794 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 RFC4P35249 363 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CASP4P49662 377 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 EDRF1Q3B7T1 1238 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 MIEF2Q96C03 454 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 BCAS3Q9H6U6 928 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 SEPT11Q9NVA2 429 aaKnown RBP11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 GCNT4Q9P109 453 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 AMFRQ9UKV5 643 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 NR2E1Q9Y466 385 aa11.44□□□□□ -0.58
CX3CL1-201ENST00000006053 BTNL10A8MVZ5 291 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 AKAP3O75969 853 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 PLCG2P16885 1265 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 RHBDL3P58872 404 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 NBPF9Q3BBW0 867 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 N4BP2L2Q92802 583 aaPredicted RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 DDX3XO00571 662 aaKnown RBP eCLIP11.43□□□□□ -0.583e-14■■■□□ 17.3
CX3CL1-201ENST00000006053 RASSF9O75901 435 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 GALCP54803 685 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 DDR1Q08345 913 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 ZNF543Q08ER8 600 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 KNOP1Q1ED39 458 aaKnown RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 AGBL2Q5U5Z8 902 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 PPP4R3CPQ6ZMV5 832 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 EIF1ADQ8N9N8 165 aaKnown RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 SELENOSQ9BQE4 189 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 AFF2P51816 1311 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 F8VZ95 297 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 CYP4A11Q02928 519 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 ZNF211Q13398 564 aaPredicted RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 GKAP1Q5VSY0 366 aaPredicted RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 FRMD5Q7Z6J6 570 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 NT5DC3Q86UY8 548 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 FMO2Q99518 471 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 ACTR5Q9H9F9 607 aaPredicted RBP11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 IRAK4Q9NWZ3 460 aa11.43□□□□□ -0.58
CX3CL1-201ENST00000006053 GGA2Q9UJY4 613 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms