RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Fgd4Q91ZT5 766 aa9.91□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Vmp1Q99KU0 406 aa9.91□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Actn2Q9JI91 894 aa9.91□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nme9A0A1L1SUL6 329 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cdc27A2A6Q5 825 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Stat3P42227 770 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 PtgdrP70263 357 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Meis3P97368 378 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Zscan2Q07230 614 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Stxbp3Q60770 592 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Edrf1Q6GQV7 1239 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Rmdn2Q8BSE0 410 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Sertad1Q9JL10 236 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm7995L7N2E4 160 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Kcnh2O35219 1162 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gap43P06837 227 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Dab2P98078 766 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Proser2Q8C5R2 471 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pdia6Q922R8 440 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Snx24Q9CRB0 169 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Arl6ip4Q9JM93 229 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Itga2bQ9QUM0 1033 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tubgcp6G5E8P0 1769 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Arhgef10lA2AWP8 1280 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Casp12O08736 419 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nedd4P46935 887 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Fam8a1Q3URQ4 399 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tbc1d1Q60949 1255 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Snx16Q8C080 344 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 E4f1Q8CCE9 783 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 YarsQ91WQ3 528 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Grin3bQ91ZU9 1003 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 ArpinQ9D0A3 226 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pramef12Q9D2F1 463 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Mtmr2Q9Z2D1 643 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 DnmbpQ6TXD4 1580 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Zfand4D3Z3C6 739 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tmod1P49813 359 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Syne3Q4FZC9 975 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Lrig2Q52KR2 1054 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Coa7Q921H9 231 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Spdl1Q923A2 608 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pacsin2Q9WVE8 486 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Znf711A2ANX9 761 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Dthd1E9PZX1 795 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Raph1F2Z3U3 1266 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 LdhbP16125 334 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Igfbp6P47880 238 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cep126Q0VBV7 1103 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 AsnsQ61024 561 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Mrps31Q61733 384 aaKnown RBP9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Q6PD19 689 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Klhl29Q80T74 875 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Etnk1Q9D4V0 363 aa9.9□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Atp2c2A7L9Z8 944 aa9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Setd4P58467 439 aa9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Hipk4Q3V016 616 aa9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Lonp1Q8CGK3 949 aaKnown RBP9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ints5Q8CHT3 1018 aa9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Snrnp27Q8K194 155 aa9.9□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Abca9Q8K449 1623 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Wdr19Q3UGF1 1341 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm3402K7N5P2 326 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cyp2d10P24456 504 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fam89aQ14BJ1 175 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 DeptorQ570Y9 409 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Serpinb6Q60854 378 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rd3Q8BRE0 195 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cul1Q9WTX6 776 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Abca14E9Q8F8 1683 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rad51bO35719 350 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ints9Q8K114 658 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Eif3cQ8R1B4 911 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cox16Q9CR63 106 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kif1aP33173 1695 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Arhgap42B2RQE8 841 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm21972J3QN38 98 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 C1qbpO35658 278 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc153P0C7Q1 202 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 PhbP67778 272 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fam81aQ3UXZ6 364 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ahcyl2Q68FL4 613 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 GnptabQ69ZN6 1235 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc15Q8C9M2 810 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Tmem60Q8K174 133 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 1700109H08RikQ9D9C0 210 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Map7d3A2AEY4 876 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Irx1P81068 480 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Q8BWG4 1187 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 CpdO89001 1377 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Eno1P17182 434 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 NsfP46460 744 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pold1P52431 1105 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cacnb3P54285 484 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pwp2Q8BU03 919 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Msantd4Q91YU3 345 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 CtsqQ91ZF4 343 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Mms19Q9D071 1031 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Grtp1Q9D3N8 359 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm382B1AXN3 1250 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms