RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Vmn1r65Q9EPS7 332 aa9.16□□□□□ -0.94
Trim40-203ENSMUST00000172711 Clec1bQ9JL99 229 aa9.16□□□□□ -0.94
Trim40-203ENSMUST00000172711 BcamQ9R069 622 aa9.16□□□□□ -0.94
Trim40-203ENSMUST00000172711 Nup210Q9QY81 1886 aaKnown RBP9.16□□□□□ -0.94
Trim40-203ENSMUST00000172711 Dmxl1Q6PNC0 3013 aa9.16□□□□□ -0.94
Trim40-203ENSMUST00000172711 Zfp472B0V2W5 534 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ptchd4B9EKX1 904 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Yme1l1O88967 715 aaKnown RBP9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Casp14O89094 257 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Me1P06801 572 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Stat5aP42230 793 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Adcyap1r1P70205 496 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Pkn1P70268 946 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ano7Q14AT5 859 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Fam196aQ3USH1 422 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 C87499Q3UX49 493 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 4933427I04RikQ3V053 235 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Madcam1Q61826 405 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Abcf1Q6P542 837 aaKnown RBP9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 PogkQ80TC5 607 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Slc38a9Q8BGD6 560 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ano1Q8BHY3 960 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Ranbp6Q8BIV3 1105 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Zfp120Q8BZW4 436 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Fam78aQ8C552 283 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 CnstQ8CBC4 711 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Bola3Q8CEI1 110 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Pms1Q8K119 917 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 CrygnQ8VHL5 183 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 VasnQ9CZT5 673 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Rbp7Q9EPC5 134 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Peg12Q9WVA7 283 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Pcsk5Q04592 1877 aa9.15□□□□□ -0.94
Trim40-203ENSMUST00000172711 Aox1O54754 1333 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gucy2dA0A0U1RPR8 1117 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Arhgef10lA2AWP8 1280 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pfkfb3A7UAK5 555 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Nlgn4lB0F2B4 945 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Trim30bE9PVL6 203 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 SprtnG3X912 497 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Atp2b1G5E829 1220 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gnrh1P13562 90 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ms4a2P20490 235 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Clcn3P51791 818 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Smad4P97471 551 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Nucb1Q02819 459 aaKnown RBP9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Sppl2bQ3TD49 578 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pbxip1Q3TVI8 727 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Smad2Q62432 467 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Q6P2K3 674 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 GypcQ78HU7 95 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Proser3Q7TSA6 634 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fam181bQ80VF6 417 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Npas4Q8BGD7 802 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Dnaaf2Q8BPI1 814 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Alg3Q8K2A8 438 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Atf7Q8R0S1 413 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lrrc2Q8VDB8 371 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Prmt7Q922X9 692 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ndufb9Q9CQJ8 179 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 TtpalQ9D3D0 343 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tlr6Q9EPW9 795 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Trim54Q9ERP3 366 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tob2Q9JM55 345 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 AdnpQ9Z103 1108 aaKnown RBP9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Hmg20bQ9Z104 317 aa9.15□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cyp4a29A0A087WPC3 509 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kcnb2A6H8H5 907 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Barx2O08686 283 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Dkk1O54908 272 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 FosP01101 380 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lig3P97386 1015 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Dab2P98078 766 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fdxacb1Q3UY23 622 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Usp13Q5BKP2 858 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kif1bpQ6ZPU9 617 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Trit1Q80UN9 467 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Metap1Q8BP48 386 aaKnown RBP9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ncaph2Q8BSP2 607 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Rtn1Q8K0T0 780 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 NptxrQ99J85 493 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Map4k3Q99JP0 894 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tbc1d15Q9CXF4 671 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cep89Q9CZX2 791 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Drap1Q9D6N5 205 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Extl2Q9ES89 330 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fzd2Q9JIP6 570 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pdcd7Q9WTY1 482 aa9.14□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tp53bp1P70399 1969 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gm7356A0A087WSA6 508 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 MtrA6H5Y3 1253 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pex10B1AUE5 324 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Zfp213E9QAW0 468 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Bcl7cO08664 217 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 DgkaO88673 730 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 UgcgO88693 394 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lamp2P17047 415 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 SarsP26638 512 aaKnown RBP9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ccr1P51675 355 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 MafbP54841 323 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms