RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 HlcsQ920N2 722 aa29.85■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Asic2Q925H0 512 aa29.85■■■□□ 2.37
Ldb1-207ENSMUST00000156585 SisF8VQM5 1818 aa29.85■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Samd1D3YXK1 519 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 TazI7HJS2 263 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Etv6P97360 485 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Irak1Q62406 710 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Ppp1r13bQ62415 1087 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Vps52Q8C754 723 aaKnown RBP29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Prpf40aQ9R1C7 953 aaKnown RBP29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Atp1a4Q9WV27 1032 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Serpinb8O08800 374 aaKnown RBP29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Nck2O55033 380 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Mmp10O55123 476 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Hook2Q7TMK6 716 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Luc7lQ9CYI4 371 aaKnown RBP29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 4930548H24RikQ9D496 437 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Il21rQ9JHX3 529 aa29.84■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Gm1758F6VZZ1 202 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Atp9aO70228 1047 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Kiaa1211Q5PR69 1207 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 YwhabQ9CQV8 246 aaKnown RBP29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Cd2bp2Q9CWK3 342 aaKnown RBP29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Scn10aQ6QIY3 1958 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 SfnO70456 248 aaKnown RBP29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 AlcamQ61490 583 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Scaf8Q6DID3 1268 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 TbataQ7TSD4 393 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Card14Q99KF0 999 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 Hebp1Q9R257 190 aa29.83■■■□□ 2.37
Ldb1-207ENSMUST00000156585 CfhP06909 1234 aa29.82■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Psmc5P62196 406 aa29.82■■■□□ 2.36
Ldb1-207ENSMUST00000156585 MaeaQ4VC33 396 aa29.82■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Sh3gl1Q62419 368 aa29.82■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Dcaf15Q6PFH3 600 aa29.82■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Recql4Q75NR7 1216 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 OtoaQ8K561 1137 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mrps5Q99N87 432 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Dcdc2bF7BCK0 340 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Tnfrsf11aO35305 625 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Gad1P48318 593 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Top1Q04750 767 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Neurl1bQ0MW30 546 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Antxr2Q6DFX2 487 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Dync1li2Q6PDL0 492 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Acad11Q80XL6 779 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Serpinb13Q8CDC0 389 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Vcpip1Q8CDG3 1220 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Creb3l3Q91XE9 479 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Tmem132aQ922P8 1018 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 AdarQ99MU3 1178 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mageb16Q9CWV4 363 aa29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Zranb2Q9R020 330 aaKnown RBP29.81■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Calcoco2A2A6M5 331 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 UgcgO88693 394 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Eepd1Q3TGW2 569 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Reep2Q8VCD6 254 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Bzw2Q91VK1 419 aaKnown RBP29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mxra8Q9DBV4 442 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Trim10Q9WUH5 489 aa29.8■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Gprin1Q3UNH4 932 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Lrig2Q52KR2 1054 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Atp13a4Q5XF90 1193 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Six2Q62232 296 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Tgoln2Q62314 363 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Pls3Q99K51 630 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Aldh1b1Q9CZS1 519 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Fthl17aQ9DAX0 182 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Sertad2Q9JJG5 309 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Ddx20Q9JJY4 825 aaKnown RBP29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 E2f8Q58FA4 860 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Map3k11Q80XI6 850 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Zswim4Q8C7B8 1101 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Cbwd1Q8VEH6 393 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Srgap2Q91Z67 1071 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mipol1Q9D9F8 279 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Trp53inp1Q9QXE4 239 aa29.79■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Akap2O54931 893 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Hoxc10P31257 342 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 LbrQ3U9G9 626 aaKnown RBP29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Rnf207Q3V3A7 635 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mapk6Q61532 720 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Ppp2r5aQ6PD03 486 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Prl7b1Q8CGZ9 251 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Mrgprx1Q8CIP3 322 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 FktnQ8R507 461 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 DohhA0A1Y7VJ29 135 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Gjb6P70689 261 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Edem3Q2HXL6 931 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Atp1a2Q6PIE5 1020 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 EtnpplQ8BWU8 499 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Grtp1Q9D3N8 359 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 ThegQ9JMB1 375 aa29.78■■■□□ 2.36
Ldb1-207ENSMUST00000156585 1700018F24RikB2RW27 314 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Q3UJP5 209 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Skap1Q3UUV5 355 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Spdye4aQ5IBH6 268 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Zbtb7bQ64321 544 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Krit1Q6S5J6 736 aa29.77■■■□□ 2.36
Ldb1-207ENSMUST00000156585 Ankrd13cQ3UX43 541 aa29.76■■■□□ 2.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms