RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rps6ka1P18653 724 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ppp3ccP48455 513 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Actn4P57780 912 aaKnown RBP10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Senp1P59110 640 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ppp1r21Q3TDD9 780 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Spty2d1Q68FG3 682 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 IqceQ6PCQ0 778 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cyp2d12Q8BVD2 504 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Slc39a13Q8BZH0 361 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pnpt1Q8K1R3 783 aaKnown RBP10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 OtoaQ8K561 1137 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Otud7aQ8R554 926 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Caskin2Q8VHK1 1201 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Vps16Q920Q4 839 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zmynd10Q99ML0 440 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bicc1Q99MQ1 977 aaKnown RBP10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bpifa3Q9D9J8 232 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tacc3Q9JJ11 631 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 MetP16056 1379 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Btbd35f16A0A087WSN2 498 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Prl3d3A0A0M6L0J6 224 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 JrklB2RRL2 523 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Slc39a2G3X943 309 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rhbdl3P58873 404 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mark3Q03141 753 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Kcnma1Q08460 1209 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Trappc10Q3TLI0 1259 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gas8Q60779 478 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cnga2Q62398 664 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fbxo41Q6NS60 873 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Lrrd1Q8C0R9 853 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Hs2st1Q8R3H7 356 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Eif4a3Q91VC3 411 aaKnown RBP10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Vps36Q91XD6 386 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Inpp4aQ9EPW0 939 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Kat6bQ8BRB7 1872 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Arhgap42B2RQE8 841 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tmem45a2B7ZWJ5 289 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zfp607bG3X9H3 648 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Metap2O08663 478 aaKnown RBP10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Capn6O35646 641 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 InaP46660 501 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Map3k13Q1HKZ5 959 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sec31aQ3UPL0 1230 aaKnown RBP10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sun3Q5SS91 320 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tmem67Q8BR76 992 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bmt2Q8BXK4 403 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 SowahcQ8C0J6 512 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pglyrp2Q8VCS0 530 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ndufb5Q9CQH3 189 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tsc1Q9EP53 1161 aa10.49□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Kbtbd2G3X9X1 623 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Arpc4P59999 168 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fbp2P70695 339 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ankrd27Q3UMR0 1048 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Olfm4Q3UZZ4 505 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Znf827Q505G8 1078 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Il17aQ62386 158 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fgd5Q80UZ0 1219 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fam181bQ80VF6 417 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gimap5Q8BWF2 308 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rtp1Q8C8C1 263 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Atp1a1Q8VDN2 1023 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Usp11Q99K46 921 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nmd3Q99L48 503 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PpidQ9CR16 370 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Hao1Q9WU19 370 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Myh15E9Q264 1925 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 OvosQ3UU35 1456 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Phf11A6H5X4 337 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Prdm15E9Q8T2 1174 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Snap23O09044 210 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 P4hbP09103 509 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cyp2d10P24456 504 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pms2P54279 859 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Stxbp5lQ5DQR4 1185 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Adad1Q5SUE7 619 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cnot7Q60809 285 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Kiaa1328Q6NZK5 612 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nup93Q8BJ71 819 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Efl1Q8C0D5 1127 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Apol7cQ8C6E1 369 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 4921504E06RikQ8CET2 560 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Trip10Q8CJ53 603 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zmat2Q9CPW7 199 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Efhd1Q9D4J1 240 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tsga8Q9JJL0 238 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pard6bQ9JK83 371 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gm5934D3Z4U6 212 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pdk4O70571 412 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PorP37040 678 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PpargP37238 505 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Llgl2Q3TJ91 1027 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Plekha7Q3UIL6 1118 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ankrd13cQ3UX43 541 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Vav2Q60992 868 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 MogsQ80UM7 834 aaKnown RBP10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cyp4f39Q8BGU0 532 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mettl21cQ8BLU2 248 aa10.48□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 RbakQ8BQC8 711 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms