RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Scnn1aQ61180 699 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Usp8Q80U87 1080 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Wdr60Q8C761 999 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 NemfQ8CCP0 1064 aaKnown RBP11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 AticQ9CWJ9 592 aaKnown RBP11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zswim7Q9CWQ2 152 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ttc37F8VPK0 1563 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm28360A0A087WR25 190 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zfp212G3X8R7 492 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tlr7P58681 1050 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mif4gdQ3UBZ5 222 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gps1Q99LD4 471 aaKnown RBP11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm1758F6VZZ1 202 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Clic6Q8BHB9 596 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mccc1Q99MR8 717 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Cyp3a59D3Z2W7 503 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Eddm13E9Q7F5 164 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 GfapP03995 430 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mup5P11591 180 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Q3KNL4 93 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Supt20hQ7TT00 530 aaKnown RBP11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ctdspl2Q8BG15 465 aa11.17□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Armc7Q3UJZ3 198 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ric8bQ80XE1 520 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Cgref1Q8R1U2 281 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm29133A0A1B0GT72 266 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Hsdl2Q2TPA8 490 aaKnown RBP11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 C2cd5Q7TPS5 1016 aaKnown RBP11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Trim36Q80WG7 729 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Abi1Q8CBW3 481 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Znf541Q0GGX2 1363 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Q8C5C9 218 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Vps39Q8R5L3 886 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Spag6Q9JLI7 507 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ttc38A3KMP2 465 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Serpina3iD3Z450 408 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Spag7Q7TNE3 227 aaKnown RBP11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fbxo44Q8BK26 255 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Paip2bQ91W45 136 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Wars2Q9CYK1 360 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ndufa13Q9ERS2 144 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ppef2O35385 757 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Dennd2cQ6P9P8 914 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ankrd23Q812A3 306 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ppp2r5cQ60996 524 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Klhl11Q8CE33 709 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Akt3Q9WUA6 479 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 RnaselQ05921 735 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Nlrp4fQ66X05 959 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 4932411N23RikQ8C0S0 470 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Terb1Q8C0V1 768 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 EpgnQ924X1 152 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Usp35M0QWN7 1009 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ms4a2P20490 235 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Kcnma1Q08460 1209 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gucy2fQ5SDA5 1108 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tmem132cQ8CEF9 1099 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Stxbp5Q8K400 1152 aaKnown RBP11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gpsm2Q8VDU0 679 aa11.16□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ttc39dQ0VF76 604 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Cfap36Q8C6E0 343 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Spire2Q8K1S6 718 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mageb2A2AHM0 380 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Pja1O55176 578 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Krt80Q0VBK2 452 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Ces1eQ64176 562 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rnf112Q96DY5 654 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 ArpinQ9D0A3 226 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zbtb18Q9WUK6 522 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Psmd10Q9Z2X2 231 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 DgkkE9Q7N4 1118 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Tada3Q8R0L9 432 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Kcnq5Q9JK45 933 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gfpt2Q9Z2Z9 682 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 DohhA0A1Y7VJ29 135 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 A0A1Y7VML8 143 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Myh8P13542 1937 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Nbr1P97432 988 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Dab2ipQ3UHC7 1189 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Krt5Q922U2 580 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Dbndd2Q9CRD4 158 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Zfp626A0A0U1RQ84 676 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fam129cD3YZB0 591 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm2237E9Q501 211 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm3591K7N6X2 186 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Prl3b1P09586 222 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Lrch1P62046 709 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rrp36Q3UFY0 244 aaKnown RBP11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Gm13103Q4VAD2 491 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Caln1Q9JJG7 219 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Fkbp1aP26883 108 aaKnown RBP11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Mtss1Q8R1S4 759 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Rtn3Q9ES97 964 aa11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Wdr46Q9Z0H1 622 aaKnown RBP11.15□□□□□ -0.62
Scn8a-201ENSMUST00000082209 Dpcr1Q3TNW5 500 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Gm136Q3V037 328 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Mcf2lQ64096 1149 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Kiaa0391Q8JZY4 584 aaKnown RBP11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Stard7Q8R1R3 373 aa11.15□□□□□ -0.63
Scn8a-201ENSMUST00000082209 Upb1Q8VC97 393 aa11.15□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms