RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Ranbp17Q99NF8 1088 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 YwhabQ9CQV8 246 aaKnown RBP13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rwdd2aQ9D9S3 292 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cyp2s1Q9DBX6 501 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Dnajc7Q9QYI3 494 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 DexiQ9WUQ7 95 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gjd2O54851 321 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 P4hbP09103 509 aaKnown RBP13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Atoh1P48985 351 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Dcaf17Q3TUL7 519 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 RnpepQ8VCT3 650 aaKnown RBP13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 VillQ91YD6 859 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tmem192Q9CXT7 266 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ccdc89Q9DA73 370 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 1700016G14RikA0A286YCZ6 238 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Heatr4E9Q357 955 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Magea4F2Z493 315 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gna14P30677 355 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ppp1r13bQ62415 1087 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rhbdf1Q6PIX5 856 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Mrpl58Q8R035 206 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Slc14a1Q8VHL0 384 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Nxf1Q99JX7 618 aaKnown RBP13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Smtnl1Q99LM3 459 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 IydQ9DCX8 285 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Trp53inp1Q9QXE4 239 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Usp34Q6ZQ93 3582 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Dhtkd1A2ATU0 921 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Pou2f2Q00196 463 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rufy4Q3TYX8 563 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ogfod1Q3U0K8 545 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Eif3j1Q3UGC7 261 aaKnown RBP13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rnf207Q3V3A7 635 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Spdye4aQ5IBH6 268 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 PodnQ7TQ62 611 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Trnp1Q80ZI1 223 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Maats1Q8BRC6 783 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 EtnpplQ8BWU8 499 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Adgra1Q8C4G9 578 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 PpatQ8CIH9 517 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Eef1gQ9D8N0 437 aaKnown RBP13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fndc3c1Q6DFV6 1356 aa13.61□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sec14l1A8Y5H7 715 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Celf5D3Z4T1 395 aaKnown RBP13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Zfp408H7BX78 710 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gm8298J3QPI0 401 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Serpinb2P12388 415 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Olfm4Q3UZZ4 505 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tpm4Q6IRU2 248 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Asic3Q6X1Y6 530 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Snd1Q78PY7 910 aaKnown RBP13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Pnma1Q8C1C8 353 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Kiaa0391Q8JZY4 584 aaKnown RBP13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sgms1Q8VCQ6 419 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cntnap2Q9CPW0 1332 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Scgb2b11A0A087WR49 112 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gm45194A0A140LJG2 572 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cyp11b2P15539 500 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cxcl9P18340 126 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Trappc3lQ4KL14 181 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Znf354cQ571J5 560 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Atp13a4Q5XF90 1193 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Exoc3Q6KAR6 755 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Atp1a2Q6PIE5 1020 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sestd1Q80UK0 696 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Eif4a3Q91VC3 411 aaKnown RBP13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Itm2cQ91VK4 269 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Dbndd2Q9CRD4 158 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Skor2A7M7C7 1008 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sema4dO09126 861 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cetn3O35648 167 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ms4a1P19437 291 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tcerg1lQ3B807 590 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Pank4Q80YV4 820 aa13.6□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gm45140A0A0N4SUM8 220 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Exoc4O35382 975 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ly9Q01965 654 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Slc16a10Q3U9N9 512 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Dnajc17Q91WT4 303 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rpap3Q9D706 660 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Bub1bQ9Z1S0 1052 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gcom1E9PZ54 550 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Kcnh2O35219 1162 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Stra6O70491 670 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Actr2P61161 394 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Zc3h18Q0P678 948 aaKnown RBP13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 MyzapQ3UIJ9 466 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gm1587Q3UT80 123 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Haus4Q8BFT2 363 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Scyl2Q8CFE4 930 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sash3Q8K352 380 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 1700020D05RikQ99PB1 294 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 PdclQ9DBX2 301 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Plod3Q9R0E1 741 aa13.59□□□□□ -0.23
Lig3-202ENSMUST00000080461 Lamb2Q61292 1799 aa13.58□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fam129cD3YZB0 591 aa13.58□□□□□ -0.23
Lig3-202ENSMUST00000080461 Timm44O35857 452 aa13.58□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ifnar1P33896 590 aa13.58□□□□□ -0.23
Lig3-202ENSMUST00000080461 PklrP53657 574 aa13.58□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tmem63bQ3TWI9 832 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms