RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Prl7b1Q8CGZ9 251 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Onecut3Q8K557 490 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Bzw2Q91VK1 419 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Nxf1Q99JX7 618 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Myh3P13541 1940 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Pnpla6Q3TRM4 1355 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm3127E9Q9P5 263 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm3453K7N724 263 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cyp2e1Q05421 493 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Kcnma1Q08460 1209 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lilrb4Q64281 335 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Daam2Q80U19 1115 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cct8l1Q80YT3 562 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Usp38Q8BW70 1042 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ppp1r11Q8K1L5 131 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cgref1Q8R1U2 281 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Synpo2Q91YE8 1087 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Sdr42e1Q9D665 394 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tacc3Q9JJ11 631 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Clrn2B2RVW2 232 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 DgkkE9Q7N4 1118 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cacna2d1O08532 1103 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Il27raO70394 623 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Diaph2O70566 1098 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 D1Pas1P16381 660 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Pde6bP23440 856 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gcnt1Q09324 428 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Vars2Q3U2A8 1060 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Serpinb1cQ5SV42 375 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Atp13a4Q5XF90 1193 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ddx3xQ62167 662 aaKnown RBP10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Trim21Q62191 470 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rassf6Q80UQ2 353 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ms4a5Q810P8 197 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Kbtbd4Q8R179 534 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc26a7Q8R2Z3 656 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Fxr2Q9WVR4 673 aaKnown RBP10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm11983V9GXS8 105 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Uhmk1P97343 419 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ctnna2Q61301 953 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lca5Q80ST9 704 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ints8Q80V86 995 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Naa25Q8BWZ3 972 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 PaoxQ8C0L6 504 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lrrc14Q8VC16 493 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rfc4Q99J62 364 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Txnrd3Q99MD6 652 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ranbp17Q99NF8 1088 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Armc9Q9D2I5 817 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rabl3Q9D4V7 236 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rbm6S4R1W5 1118 aaKnown RBP10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mms22lB1AUR6 1238 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm1758F6VZZ1 202 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Zc3h7bF8VPP8 982 aaKnown RBP10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 AcrbpQ3V140 540 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Asap3Q5U464 904 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Dennd2aQ8C4S8 1000 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Podxl2Q8CAE9 603 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Bud13Q8R149 637 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Nfu1Q9QZ23 255 aa10.54□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm1661E9Q963 441 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Serpinb6eI7HJI3 429 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 DtnbO70585 659 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Chmp6P0C0A3 200 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Adcy7P51829 1099 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cep126Q0VBV7 1103 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Klra9Q2TJJ8 266 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Prr7Q3V0I2 269 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 C130026I21RikQ8C898 291 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc18a1Q8R090 521 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Thoc1Q8R3N6 657 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 LrmdaQ9D9B4 229 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 1700017N19RikA0A087WPJ1 469 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Atp2c2A7L9Z8 944 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 PurbO35295 324 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 AurkbO70126 345 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 ProcP33587 460 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 TbataQ7TSD4 393 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 FtoQ8BGW1 502 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rab44Q8CB87 725 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 OtoaQ8K561 1137 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Acat1Q8QZT1 424 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Irx5Q9JKQ4 484 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Stk11Q9WTK7 436 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 AfdnQ9QZQ1 1820 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm8994E9PV04 411 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Zfp42P22227 288 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Xrcc5P27641 732 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Krt35Q497I4 455 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gcfc2Q8BKT3 769 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ddah1Q9CWS0 285 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Calr3Q9D9Q6 380 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Usp14Q9JMA1 493 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ptf1aQ9QX98 324 aa10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tjp2Q9Z0U1 1167 aaKnown RBP10.53□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Usp17lbE9Q9U0 468 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Calb1P12658 261 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 ArsiQ32KI9 573 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm10488Q4KL05 212 aa10.52□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Miga1Q4QQM5 600 aa10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms