RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Fam81bA0A140LI28 432 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Mtco1P00397 514 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Hoxc6P10629 235 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Mief2Q5NCS9 454 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Phka2Q8BWJ3 1235 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ppfibp1Q8C8U0 969 aaKnown RBP8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ago4Q8CJF8 861 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Vps18Q8R307 973 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Usp31E9Q6Y8 1344 aa8.62□□□□□ -1.03
Lig3-201ENSMUST00000021039 Gm13084A2A8N0 494 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rexo5D3YW29 759 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Usp17ldG5E8G2 545 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Usp17lcG5E8I7 545 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Bcat1P24288 386 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Cd180Q62192 661 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Mysm1Q69Z66 819 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Krt39Q6IFX4 482 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 C2cd5Q7TPS5 1016 aaKnown RBP8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Q80ZQ3 298 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ces4aQ8R0W5 563 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ndfip2Q91ZP6 311 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Emc2Q9CRD2 297 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ubxn11Q9D572 484 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Serpina16D3Z660 418 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Cbx2P30658 519 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Zdhhc9P59268 364 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 FerP70451 823 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Med7Q9CZB6 233 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Krt20Q9D312 431 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rwdd2aQ9D9S3 292 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tnni1Q9WUZ5 187 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Gimap9G3X987 291 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Kcnb1Q03717 857 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Miga1Q4QQM5 600 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tor4aQ8BH02 426 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Alg3Q8K2A8 438 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rassf9Q8K342 435 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Dcaf8Q8N7N5 591 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Znhit2Q9QY66 399 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ltbp1Q8CG19 1712 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 CcnoP0C242 352 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Yy1Q00899 414 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tcf12Q61286 706 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Krt74Q6IFZ9 495 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Lig4Q8BTF7 911 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Fam204aQ8C6C7 236 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Kcnk13Q8R1P5 405 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Atp6v0a4Q920R6 833 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 PrkcbP68404 671 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Capn13Q3UW68 665 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Btg1-ps1Q3V0S2 161 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Btg1-ps2Q3V0X0 161 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Brip1Q5SXJ3 1174 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 HarsQ61035 509 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tm4sf1Q64302 202 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Raver2Q7TPD6 673 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rab11fip4Q8BQP8 635 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Sec63Q8VHE0 760 aaKnown RBP8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rpn1Q91YQ5 608 aaKnown RBP8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 SerhlQ9EPB5 311 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Mkrn1Q9QXP6 481 aa8.61□□□□□ -1.03
Lig3-201ENSMUST00000021039 Stk10O55098 966 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Nipa1Q8BHK1 323 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Pls3Q99K51 630 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Plod3Q9R0E1 741 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Naaladl2A0A0N4SUJ3 795 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ttc13A0A1L1SSC7 844 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 A0A286YCQ6 122 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Entpd7Q3TCT4 606 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Znf12Q7TSI0 686 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Micall1Q8BGT6 870 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Inpp5fQ8CDA1 1132 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ap3m2Q8R2R9 418 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rhobtb2Q91V93 728 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Nova2D3YVV7 556 aaKnown RBP8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Nsun7Q14AW5 724 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 EmsyQ8BMB0 1264 aaKnown RBP8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Nup58Q8R332 587 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Sgpp1Q9JI99 430 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Herc3A6H6S0 1050 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 NsfP46460 744 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rasa2P58069 847 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tubb4bP68372 445 aaKnown RBP8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Tex35Q14BK3 207 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Dlg1Q811D0 905 aaKnown RBP8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Fam161bQ8CB59 589 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Klhl11Q8CE33 709 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Slc25a38Q91XD8 326 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ttc38A3KMP2 465 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Znf568E9PYI1 671 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Atp2a2O55143 1044 aaKnown RBP8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Psmb7P70195 277 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Garem2Q6PAJ3 880 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Acad11Q80XL6 779 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Cdkn2aipQ8BI72 563 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Rd3Q8BRE0 195 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Dnajc17Q91WT4 303 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Psmd6Q99JI4 389 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ndst4Q9EQW8 872 aa8.6□□□□□ -1.03
Lig3-201ENSMUST00000021039 Ly6iQ9WU67 134 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms