RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Spg7Q3ULF4 781 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Trpc6Q61143 930 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ccdc15Q8C9M2 810 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Hps4Q99KG7 671 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gja10Q9WUS4 505 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gm45261A0A1B0GSP6 197 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Aco1P28271 889 aaKnown RBP20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ankzf1Q80UU1 748 aaKnown RBP20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 HyiQ8R1F5 277 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Trpm8Q8R4D5 1104 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Lzts2Q91YU6 671 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Pde6cQ91ZQ1 861 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 IscuQ9D7P6 168 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 FscbA1EGX6 1074 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gm6588E9Q3K0 461 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Atp2a2O55143 1044 aaKnown RBP20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Sh3d21Q7TSG5 549 aa20.19■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rpl13P47963 211 aaKnown RBP20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ephb2P54763 986 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rps8P62242 208 aaKnown RBP20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Pfkfb2P70265 519 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rrp36Q3UFY0 244 aaKnown RBP20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Zfp449Q8CB76 518 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Serpinb13Q8CDC0 389 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 AdnpQ9Z103 1108 aaKnown RBP20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Myh8P13542 1937 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Pnpla6Q3TRM4 1355 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Scgb2b7D3YYY1 112 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 PctpP53808 214 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Acot6Q32Q92 419 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 R3hdm2Q80TM6 1044 aaKnown RBP20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ints8Q80V86 995 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Tktl2Q9D4D4 627 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Nlrp5Q9R1M5 1163 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Frmpd4A2AFR3 1320 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Fdx1P46656 188 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 CcnjlQ5SRT8 387 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Cyp26b1Q811W2 512 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Nsmce1Q9D720 266 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Trip6Q9Z1Y4 480 aa20.18■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Olfr310B2RVZ1 332 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Kcnk16G5E845 292 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Kcnu1O54982 1121 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ets2P15037 468 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Klra9Q2TJJ8 266 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gm5592Q3V0A6 857 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Pnma5Q5DTT8 618 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Klra5Q60652 266 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 3830417A13RikQ8BQJ2 303 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Hsf2bpQ9D4G2 338 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gbp2Q9Z0E6 589 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Fam47eD3YWC7 402 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Casp14O89094 257 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Chrm1P12657 460 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Tmed8Q3UHI4 326 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Kif22Q3V300 660 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Nlrp14Q6B966 993 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Q6PD19 689 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 CbsQ91WT9 561 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Mxra8Q9DBV4 442 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Oip5A2AQ14 241 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Nr1i3O35627 358 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Zc3h18Q0P678 948 aaKnown RBP20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Slc10a4Q3UEZ8 437 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Cd37Q61470 281 aa20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rfwd2Q9R1A8 733 aaKnown RBP20.17■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Slc35g2D3YVE8 412 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 CflarO35732 481 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Casp4P70343 373 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Muc3aQ3U5A2 218 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Krt31Q61765 416 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Mcf2lQ64096 1149 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rpa1Q8VEE4 623 aaKnown RBP20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Cbwd1Q8VEH6 393 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ears2Q9CXJ1 523 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rgs9bpQ148R9 237 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Dnajc8Q6NZB0 253 aaKnown RBP20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Zbtb39Q6PDK0 712 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Yars2Q8BYL4 472 aaKnown RBP20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Gtf2ird1Q9JI57 1104 aaKnown RBP20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Aox3G3X982 1335 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Trappc11B2RXC1 1133 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 HnrnpdQ60668 355 aaKnown RBP20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Tor4aQ8BH02 426 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Rbm41Q8JZV4 413 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Ppp1r3aQ99MR9 1089 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Tmem191cQ9JJB1 302 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 ArcQ9WV31 396 aa20.16■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Mrc1Q61830 1456 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 DohhA0A1Y7VJ29 135 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 A1cfQ5YD48 595 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Sin3bQ62141 1098 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Haus6Q6NV99 933 aaKnown RBP20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Spata24Q6P926 205 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Pex19Q8VCI5 299 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Mageb16Q9CWV4 363 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Cib2Q9Z309 187 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Abi2P62484 446 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 EnahQ03173 802 aa20.15■□□□□ 0.82
Ubp1-201ENSMUST00000009885 Retreg2Q6NS82 541 aa20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms