RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Dlgap3Q6PFD5 977 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tlr11Q6R5P0 926 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Med23Q80YQ2 1367 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm6370A0A0G2JGX9 315 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm6309L7N481 315 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Stag2O35638 1231 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Rab17P35292 214 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nlrp1aQ2LKU9 1182 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Adrbk2Q3UYH7 688 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Psmd9Q9CR00 222 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ddx47Q9CWX9 455 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Sugt1Q9CX34 336 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 MrrfQ9D6S7 262 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ddx25Q9QY15 484 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 TriqkB2B9E1 86 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gm5926E9PWJ8 236 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Rps6P62754 249 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Spag6Q3V0U9 509 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ddx55Q6ZPL9 600 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Leng8Q8CBY3 785 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pnpt1Q8K1R3 783 aaKnown RBP13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Retreg1dQ8VE91 480 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 ChiaQ91XA9 473 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pcdhb12Q91Y07 789 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nsmce1Q9D720 266 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Eif2ak3Q9Z2B5 1114 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Bnip3lQ9Z2F7 218 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Plekhg1F6S200 1446 aa13.04□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pola1P33609 1465 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 H2afxP27661 143 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Psmb9P28076 219 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Garnl3Q3V0G7 1038 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Setd3Q91WC0 594 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pcsk1nQ9QXV0 258 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tbk1Q9WUN2 729 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Mzf1S4R1L6 814 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Trappc8E9PWG2 1437 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tada2bD3Z4Z0 420 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 March10E9PX79 788 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Prl3b1P09586 222 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Grin1P35438 938 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Cab39Q06138 341 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ifnl2Q4VK74 193 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Sdf4Q61112 361 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Parp9Q8CAS9 866 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Cfap61Q8CEL2 1252 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Alg1Q921Q3 482 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Grtp1Q9D3N8 359 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ifi30Q9ESY9 248 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Fyb2A2A995 729 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Map3k12Q60700 888 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Krt31Q61765 416 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Fbxo38Q8BMI0 1194 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Dnajc14Q921R4 703 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ercc4Q9QZD4 917 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ccdc194A0A140LIT1 234 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 R3hdm1E9Q9Q2 1135 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 DffaO54786 331 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Per2O54943 1257 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 D1Pas1P16381 660 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 CiitaP79621 1155 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Agap2Q3UHD9 1186 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ceacam5Q3UKK2 947 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Bcap31Q61335 245 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Lrrc1Q80VQ1 524 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Agr3Q8R3W7 165 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 St5Q924W7 1134 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Slc24a3Q99PD7 645 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Hic2Q9JLZ6 619 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Tulp1Q9Z273 543 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Usp42B2RQC2 1324 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Pla2g4bP0C871 782 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Csn1s1P19228 313 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Msh2P43247 935 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ckap2Q3V1H1 664 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Ino80dQ66JY2 873 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Rbm26Q6NZN0 1012 aaKnown RBP13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Bbs7Q8K2G4 715 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Dnajc10Q9DC23 793 aa13.03□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 B020011L13RikA0A087WQI7 412 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Fam47eD3YWC7 402 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Akap10O88845 662 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Nfkbil1O88995 381 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 S100a6P14069 89 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Heatr9Q5QNV8 569 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 BcrQ6PAJ1 1270 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Llgl1Q80Y17 1036 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Znf598Q80YR4 908 aaKnown RBP13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Fam180aQ8BR21 173 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 GancQ8BVW0 898 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Cdk9Q99J95 372 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Vwa5aQ99KC8 793 aaKnown RBP13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Snf8Q9CZ28 258 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Gipc2Q9Z2H7 314 aa13.02□□□□□ -0.32
Pcdhac1-201ENSMUST00000007584 Kcna1P16388 495 aa13.02□□□□□ -0.33
Pcdhac1-201ENSMUST00000007584 Runx1t1Q61909 577 aa13.02□□□□□ -0.33
Pcdhac1-201ENSMUST00000007584 Tmem120aQ8C1E7 343 aa13.02□□□□□ -0.33
Pcdhac1-201ENSMUST00000007584 NptxrQ99J85 493 aa13.02□□□□□ -0.33
Pcdhac1-201ENSMUST00000007584 Snrnp35Q9D384 244 aa13.02□□□□□ -0.33
Pcdhac1-201ENSMUST00000007584 Rexo5D3YW29 759 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms