RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	CLB3	P24870	427 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	MEF1	P25039	761 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	SSE1	P32589	693 aa	Known RBP	9.76	□□□□□ -0.85
PEX25	YPL112C	YOR062C	P36025	268 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	ECO1	P43605	281 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	EMC2	P47133	292 aa	Known RBP	9.76	□□□□□ -0.85
PEX25	YPL112C	PDR16	P53860	351 aa	Known RBP	9.76	□□□□□ -0.85
PEX25	YPL112C	SWP1	Q02795	286 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	INP1	Q03694	420 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	RAD30	Q04049	632 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	ARR1	Q06596	294 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	SNX3	Q08826	162 aa	Known RBP	9.76	□□□□□ -0.85
PEX25	YPL112C	MDM12	Q92328	271 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	TAD3	Q9URQ3	322 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	MEC1	P38111	2368 aa		9.76	□□□□□ -0.85
PEX25	YPL112C	BAR1	P12630	587 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	CBS1	P14066	229 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	YAP1	P19880	650 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	KGD1	P20967	1014 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	CTR86	P25355	563 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	LHP1	P33399	275 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	TEF4	P36008	412 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	AST2	P39945	430 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	YEL057C	P39983	233 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	PKP1	P40530	394 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	MIG2	P53035	382 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	YLR446W	Q06204	433 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	BCP1	Q06338	283 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	MFG1	Q07684	458 aa		9.75	□□□□□ -0.85
PEX25	YPL112C	RPS21B	Q3E754	87 aa	Known RBP	9.75	□□□□□ -0.85
PEX25	YPL112C	MF(ALPHA)1	P01149	165 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	ARF1	P11076	181 aa	Known RBP	9.74	□□□□□ -0.85
PEX25	YPL112C	DAT1	P13483	248 aa	Known RBP	9.74	□□□□□ -0.85
PEX25	YPL112C	RPB10	P22139	70 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	RPS1B	P23248	255 aa	Known RBP	9.74	□□□□□ -0.85
PEX25	YPL112C	DMC1	P25453	334 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	EXO84	P38261	753 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	PRE3	P38624	215 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	ANS1	P38832	159 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	TAT2	P38967	592 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	ARF3	P40994	183 aa	RIP-Chip data	9.74	□□□□□ -0.85	not detected
PEX25	YPL112C	TOM22	P49334	152 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	PBP1	P53297	722 aa	Known RBP	9.74	□□□□□ -0.85
PEX25	YPL112C	YNL033W	P53964	284 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	YNL019C	P53975	284 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	NCE101	Q02820	53 aa		9.74	□□□□□ -0.85
PEX25	YPL112C	FLP1	P03870	423 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	NCP1	P16603	691 aa	Known RBP	9.73	□□□□□ -0.85
PEX25	YPL112C	THR1	P17423	357 aa	Known RBP	9.73	□□□□□ -0.85
PEX25	YPL112C	DBP3	P20447	523 aa	Known RBP	9.73	□□□□□ -0.85
PEX25	YPL112C	GRR1	P24814	1151 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	PBN1	P25580	416 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	CWH43	P25618	953 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	HSP150	P32478	413 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	TOD6	P34219	525 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	9.73	□□□□□ -0.85	not detected
PEX25	YPL112C	GTR1	Q00582	310 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	YKU80	Q04437	629 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	PAL1	Q05518	499 aa	Known RBP	9.73	□□□□□ -0.85
PEX25	YPL112C	YIG1	Q08956	461 aa		9.73	□□□□□ -0.85
PEX25	YPL112C	GPH1	P06738	902 aa	Known RBP	9.72	□□□□□ -0.85
PEX25	YPL112C	UGA1	P17649	471 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	ERG8	P24521	451 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	YIM1	P28625	365 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	MRP8	P35719	219 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	SNU114	P36048	1008 aa	Known RBP	9.72	□□□□□ -0.85
PEX25	YPL112C	TDP1	P38319	544 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	APE4	P38821	490 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	YEL020C	P39994	560 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	SOK1	P40317	901 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	RPE1	P46969	238 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	DCP2	P53550	970 aa	Known RBP	9.72	□□□□□ -0.85
PEX25	YPL112C	YNL181W	P53878	407 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	PFA5	Q03289	374 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	SPC24	Q04477	213 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	ATG26	Q06321	1198 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	FMP45	Q07651	309 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	PSR1	Q07800	427 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	YDL177C	Q12257	170 aa		9.72	□□□□□ -0.85
PEX25	YPL112C	PRS5	Q12265	496 aa	Known RBP	9.72	□□□□□ -0.85
PEX25	YPL112C	PWP1	P21304	576 aa	Known RBP	9.71	□□□□□ -0.86
PEX25	YPL112C	PEX6	P33760	1030 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	TSL1	P38427	1098 aa	Known RBP	9.71	□□□□□ -0.86
PEX25	YPL112C	BIG1	P38813	335 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	GPI16	P38875	610 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	SMK1	P41808	388 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	LEM3	P42838	414 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	GPI1	P53306	609 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	COS6	P53344	381 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	CUZ1	P53899	274 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	SVL3	Q03088	825 aa	Known RBP	9.71	□□□□□ -0.86
PEX25	YPL112C	RSC9	Q03124	581 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	MIX14	Q04341	121 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	ERB1	Q04660	807 aa	Known RBP	9.71	□□□□□ -0.86
PEX25	YPL112C	DCR2	Q05924	578 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	OSW1	Q08692	278 aa		9.71	□□□□□ -0.86
PEX25	YPL112C	ATP2	P00830	511 aa	Known RBP	9.7	□□□□□ -0.86
PEX25	YPL112C	ADE5,7	P07244	802 aa	Known RBP	9.7	□□□□□ -0.86
PEX25	YPL112C	MSS18	P08593	268 aa		9.7	□□□□□ -0.86
PEX25	YPL112C	GAL3	P13045	520 aa		9.7	□□□□□ -0.86

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms