RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT11	YNL304W	MPH1	P40562	993 aa		7.68	□□□□□ -1.18
YPT11	YNL304W	CAK1	P43568	368 aa	Predicted RBP	7.68	□□□□□ -1.18
YPT11	YNL304W	TPS1	Q00764	495 aa	Known RBP	7.68	□□□□□ -1.18
YPT11	YNL304W	YOR365C	Q08844	703 aa		7.68	□□□□□ -1.18
YPT11	YNL304W	GUP2	Q08929	609 aa		7.68	□□□□□ -1.18
YPT11	YNL304W	BSC1	Q12140	328 aa		7.68	□□□□□ -1.18
YPT11	YNL304W	THR1	P17423	357 aa	Known RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	BUD5	P25300	642 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	RRP7	P25368	297 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	PTP2	P29461	750 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	VPH2	P32341	215 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	PUP2	P32379	260 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	CYS4	P32582	507 aa	Known RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	TOD6	P34219	525 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	RPS27A	P35997	82 aa	Known RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	SIC1	P38634	284 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	RPS27B	P38711	82 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	SSZ1	P38788	538 aa	Known RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	TDA11	P38854	504 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	UME6	P39001	836 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	SPO73	P40031	143 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	YTA6	P40328	754 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	ALB1	P47019	175 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	YJR141W	P47172	347 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	NUP57	P48837	541 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	PRM8	P53174	237 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	MTQ1	P53944	314 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	TMA20	P89886	181 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	SWP1	Q02795	286 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	SMA2	Q04658	369 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	YPR174C	Q06616	221 aa	Predicted RBP	7.67	□□□□□ -1.18
YPT11	YNL304W	REH1	Q06709	432 aa		7.67	□□□□□ -1.18
YPT11	YNL304W	RPP2B	P02400	110 aa	Known RBP	7.66	□□□□□ -1.18
YPT11	YNL304W	MXR2	P25566	168 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	BCK2	P33306	851 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	OCA5	P38738	679 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	GIP2	P40036	548 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	ICE2	P40499	491 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	SPT20	P50875	604 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	MON1	P53129	644 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	DAM1	P53267	343 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	YGR266W	P53326	701 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	VPS36	Q06696	566 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	PIN2	Q12057	282 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	REX3	Q12090	404 aa		7.66	□□□□□ -1.18
YPT11	YNL304W	RPS21B	Q3E754	87 aa	Known RBP	7.66	□□□□□ -1.18
YPT11	YNL304W	HOM3	P10869	527 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	MRPS28	P21771	286 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	not detected
YPT11	YNL304W	GSH1	P32477	678 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	MKK2	P32491	506 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	PRP21	P32524	280 aa	Predicted RBP	7.65	□□□□□ -1.18
YPT11	YNL304W	PTR2	P32901	601 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	RIM101	P33400	625 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	WBP1	P33767	430 aa	Known RBP	7.65	□□□□□ -1.18
YPT11	YNL304W	TIF3	P34167	436 aa	Known RBP	7.65	□□□□□ -1.18
YPT11	YNL304W	LST4	P34239	828 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	COG3	P40094	801 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	MSS2	P40990	351 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	SPG5	P42933	373 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	DBP6	P53734	629 aa	Known RBP	7.65	□□□□□ -1.18
YPT11	YNL304W	COG5	P53951	403 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	YAT1	P80235	687 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	ACC1	Q00955	2233 aa	Known RBP	7.65	□□□□□ -1.18
YPT11	YNL304W	URC2	Q04411	772 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	VID22	Q05934	901 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	YLR126C	Q12288	251 aa		7.65	□□□□□ -1.18
YPT11	YNL304W	YSF3	P0C074	85 aa	Predicted RBP	7.64	□□□□□ -1.19
YPT11	YNL304W	YOL163W	P0CF20	169 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	TEC1	P18412	486 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	MCK1	P21965	375 aa	Known RBP	7.64	□□□□□ -1.19
YPT11	YNL304W	NAR1	P23503	491 aa	Known RBP	7.64	□□□□□ -1.19
YPT11	YNL304W	ECM8	P38246	354 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YBR138C	P38277	524 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YBR285W	P38354	144 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YLF2	P38746	405 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	CTF8	P38877	133 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YHR210C	P38893	341 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	LEM3	P42838	414 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	JHD2	P47156	728 aa	Predicted RBP	7.64	□□□□□ -1.19
YPT11	YNL304W	MPC1	P53157	130 aa	Known RBP	7.64	□□□□□ -1.19
YPT11	YNL304W	YSA1	Q01976	231 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YPL068C	Q02749	293 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	RNH202	Q05635	350 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	YPL066W	Q12194	479 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	MMP1	Q12372	583 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	PSF1	Q12488	208 aa		7.64	□□□□□ -1.19
YPT11	YNL304W	SEN1	Q00416	2231 aa	Known RBP	7.63	□□□□□ -1.19
YPT11	YNL304W	MOD5	P07884	428 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	GLK1	P17709	500 aa	Known RBP	7.63	□□□□□ -1.19
YPT11	YNL304W	YCK1	P23291	538 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	GPI12	P23797	304 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	PBN1	P25580	416 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	HBS1	P32769	611 aa	Known RBP	7.63	□□□□□ -1.19
YPT11	YNL304W	UBS1	P38290	277 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	YIL152W	P40455	235 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	UTP25	P40498	721 aa	Known RBP	7.63	□□□□□ -1.19
YPT11	YNL304W	GCN20	P43535	752 aa	Known RBP	7.63	□□□□□ -1.19
YPT11	YNL304W	PMT3	P47190	753 aa		7.63	□□□□□ -1.19
YPT11	YNL304W	TPC1	P53257	314 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms