RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	NOP6	Q07623	225 aa	Known RBP	4.13	□□□□□ -1.75
LTO1	YNL260C	SSC1	P0CS90	654 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	DBR1	P24309	405 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	HMX1	P32339	317 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	SUR1	P33300	382 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	SDH3	P33421	198 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	MCR1	P36060	302 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	TIF5	P38431	405 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	KRE9	P39005	276 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	PES4	P39684	611 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	PRM5	P40476	318 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	YIL029C	P40538	142 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	TRM112	P53738	135 aa	Predicted RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	AIM33	Q04516	312 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	RRN11	Q04712	507 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	TSR1	Q07381	788 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	RTC5	Q12108	567 aa	Known RBP	4.12	□□□□□ -1.75
LTO1	YNL260C	AHC1	Q12433	566 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	FSH3	Q99369	266 aa		4.12	□□□□□ -1.75
LTO1	YNL260C	TRP1	P00912	224 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
LTO1	YNL260C	CLN3	P13365	580 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	NDT80	P38830	627 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	LYS12	P40495	371 aa	Known RBP	4.11	□□□□□ -1.75
LTO1	YNL260C	RET3	P53600	189 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	ALF1	P53904	254 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	MGR3	Q04472	501 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	YOR387C	Q08910	206 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	MDY2	Q12285	212 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	YER078W-A	Q3E7A2	54 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	YMR230W-A	Q3E7B5	62 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	YOR338W	Q99326	363 aa		4.11	□□□□□ -1.75
LTO1	YNL260C	HXT2	P23585	541 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	PHA2	P32452	334 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	TIR2	P33890	251 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	SBE22	P38814	852 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	MEP2	P41948	499 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	MRM2	P53123	320 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	RRN9	P53437	365 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	PBA1	Q05778	276 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	MDM36	Q06820	579 aa		4.1	□□□□□ -1.75
LTO1	YNL260C	CYC3	P06182	269 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	MRPL8	P22353	238 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	DEG1	P31115	442 aa	Known RBP	4.09	□□□□□ -1.75
LTO1	YNL260C	EFB1	P32471	206 aa	Known RBP	4.09	□□□□□ -1.75
LTO1	YNL260C	TOA2	P32774	122 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	GPX2	P38143	162 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	ALP1	P38971	573 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	SPG5	P42933	373 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	YGL114W	P53134	725 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	MTM1	P53320	366 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	YNL146W	P53906	100 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	PRO2	P54885	456 aa	Known RBP	4.09	□□□□□ -1.75
LTO1	YNL260C	HER2	Q03557	464 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	SMP3	Q04174	516 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	YPR078C	Q06813	372 aa		4.09	□□□□□ -1.75
LTO1	YNL260C	HHF1	P02309	103 aa	Known RBP	4.08	□□□□□ -1.76
LTO1	YNL260C	MNS1	P32906	549 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	YBL059W	P34224	193 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	YHK8	P38776	514 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	PTH1	P38876	190 aa	Known RBP	4.08	□□□□□ -1.76
LTO1	YNL260C	CWC25	P53854	179 aa	Known RBP	4.08	□□□□□ -1.76
LTO1	YNL260C	ABZ2	Q03266	374 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	SHS1	Q07657	551 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	EAF3	Q12432	401 aa		4.08	□□□□□ -1.76
LTO1	YNL260C	AIM45	Q12480	344 aa	Known RBP	4.08	□□□□□ -1.76
LTO1	YNL260C	PIS1	P06197	220 aa	Known RBP	4.07	□□□□□ -1.76
LTO1	YNL260C	YLL053C	P0CD98	152 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	NAM2	P11325	894 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	MAS2	P11914	482 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	YUR1	P26725	428 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	DPH5	P32469	300 aa	Predicted RBP	4.07	□□□□□ -1.76
LTO1	YNL260C	ECM8	P38246	354 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	YHR218W	P38899	603 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	SEC9	P40357	651 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	SEC27	P41811	889 aa	Known RBP	4.07	□□□□□ -1.76
LTO1	YNL260C	LCB3	P47013	409 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	COS1	P53822	381 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	MTQ1	P53944	314 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	YMR102C	Q03177	834 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	YCR024C-B	Q3E7Z8	88 aa		4.07	□□□□□ -1.76
LTO1	YNL260C	CKI1	P20485	582 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	RAD5	P32849	1169 aa	Predicted RBP	4.06	□□□□□ -1.76
LTO1	YNL260C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
LTO1	YNL260C	LIN1	P38852	340 aa	Predicted RBP	4.06	□□□□□ -1.76
LTO1	YNL260C	YDR089W	P38966	869 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	PRP39	P39682	629 aa	Known RBP	4.06	□□□□□ -1.76
LTO1	YNL260C	MAM33	P40513	266 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	YHC3	P47040	408 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	AIM24	P47127	394 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	ABM1	P47146	123 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	GPI8	P49018	411 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	ELP3	Q02908	557 aa	Known RBP	4.06	□□□□□ -1.76
LTO1	YNL260C	PRM6	Q04705	352 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	LOT6	Q07923	191 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	SMC5	Q08204	1093 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	HTZ1	Q12692	134 aa	Known RBP	4.06	□□□□□ -1.76
LTO1	YNL260C	SPO24	Q3E752	67 aa		4.06	□□□□□ -1.76
LTO1	YNL260C	RNR2	P09938	399 aa	Known RBP	4.05	□□□□□ -1.76
LTO1	YNL260C	GRR1	P24814	1151 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms