RNA–Protein interactions for RNA: YLR457C

NBP1, Transcript of Spindle pole body (SPB) component, yeast

Gene NBP1, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NBP1	YLR457C	IGD1	P43598	195 aa		2.7	□□□□□ -1.98
NBP1	YLR457C	FLC3	P53121	802 aa		2.7	□□□□□ -1.98
NBP1	YLR457C	SPR6	Q01684	191 aa		2.7	□□□□□ -1.98
NBP1	YLR457C	FCY22	Q12119	530 aa		2.7	□□□□□ -1.98
NBP1	YLR457C	ZTA1	P38230	334 aa	Known RBP	2.69	□□□□□ -1.98
NBP1	YLR457C	TCB2	P48231	1178 aa		2.69	□□□□□ -1.98
NBP1	YLR457C	TOS2	P50078	622 aa		2.69	□□□□□ -1.98
NBP1	YLR457C	YGR117C	P53270	476 aa		2.69	□□□□□ -1.98
NBP1	YLR457C	FOL3	Q12676	427 aa	Predicted RBP	2.69	□□□□□ -1.98
NBP1	YLR457C	CDC21	P06785	304 aa		2.68	□□□□□ -1.98
NBP1	YLR457C	CLB1	P24868	471 aa		2.68	□□□□□ -1.98
NBP1	YLR457C	OLA1	P38219	394 aa	Known RBP	2.68	□□□□□ -1.98
NBP1	YLR457C	INM1	P38710	295 aa		2.68	□□□□□ -1.98
NBP1	YLR457C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
NBP1	YLR457C	ATP22	P50273	684 aa	Predicted RBP	2.68	□□□□□ -1.98
NBP1	YLR457C	RUP1	Q12242	671 aa		2.68	□□□□□ -1.98
NBP1	YLR457C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
NBP1	YLR457C	RIM1	P32445	135 aa	Known RBP	2.67	□□□□□ -1.98
NBP1	YLR457C	COX13	P32799	129 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	JNM1	P36224	373 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	GPX2	P38143	162 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	GPI16	P38875	610 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	YIP5	P53108	310 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	KTR6	P54070	446 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	PIN3	Q06449	215 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	MCH1	Q07376	486 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	YDL114W	Q07530	308 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	AEP3	Q12089	606 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	YDL199C	Q12407	687 aa		2.67	□□□□□ -1.98
NBP1	YLR457C	PDX1	P16451	410 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	CPR2	P23285	205 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	RPC53	P25441	422 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	FUN26	P31381	517 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	DEP1	P31385	405 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	HSP104	P31539	908 aa	Known RBP	2.66	□□□□□ -1.98
NBP1	YLR457C	DPH2	P32461	534 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	RAD5	P32849	1169 aa	Predicted RBP	2.66	□□□□□ -1.98
NBP1	YLR457C	ECT1	P33412	323 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	ECM8	P38246	354 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	BMT2	P38278	337 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	SEC9	P40357	651 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	ZIM17	P42844	174 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	STE24	P47154	453 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	PIB2	P53191	635 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	YLR345W	Q06137	509 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	YLR456W	Q06199	204 aa		2.66	□□□□□ -1.98
NBP1	YLR457C	HTZ1	Q12692	134 aa	Known RBP	2.66	□□□□□ -1.98
NBP1	YLR457C	OPI3	P05375	206 aa		2.65	□□□□□ -1.99
NBP1	YLR457C	ZUO1	P32527	433 aa	Known RBP	2.65	□□□□□ -1.99
NBP1	YLR457C	YDR341C	Q05506	607 aa	Known RBP	2.65	□□□□□ -1.99
NBP1	YLR457C	YHC1	Q05900	231 aa	Known RBP	2.65	□□□□□ -1.99
NBP1	YLR457C	RNH203	Q12338	110 aa		2.65	□□□□□ -1.99
NBP1	YLR457C	RAX2	Q12465	1220 aa		2.65	□□□□□ -1.99
NBP1	YLR457C	CMK2	P22517	447 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	SKT5	P34226	696 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	MCR1	P36060	302 aa	Known RBP	2.64	□□□□□ -1.99
NBP1	YLR457C	DTR1	P38125	572 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	FAD1	P38913	306 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	RRN9	P53437	365 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	MCT1	Q12283	360 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	YOP1	Q12402	180 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	PRM7	Q12459	698 aa		2.64	□□□□□ -1.99
NBP1	YLR457C	PFF1	P38244	976 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	ATM1	P40416	690 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	YFL012W	P43580	148 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	KEG1	P43614	200 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	PMT5	P52867	743 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	TRM112	P53738	135 aa	Predicted RBP	2.63	□□□□□ -1.99
NBP1	YLR457C	RPL21A	Q02753	160 aa	Known RBP	2.63	□□□□□ -1.99
NBP1	YLR457C	ECM7	Q06200	448 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	UAF30	Q08747	228 aa		2.63	□□□□□ -1.99
NBP1	YLR457C	RPL21B	Q12672	160 aa	Known RBP	2.63	□□□□□ -1.99
NBP1	YLR457C	GIT1	P25346	518 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	TIR2	P33890	251 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	GEP4	P38812	185 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	ABM1	P47146	123 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	VHT1	P53241	593 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	HST1	P53685	503 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	RMT2	Q03305	412 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	ENT5	Q03769	411 aa	Known RBP	2.62	□□□□□ -1.99
NBP1	YLR457C	YPS3	Q12303	508 aa		2.62	□□□□□ -1.99
NBP1	YLR457C	TPK3	P05986	398 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	RPL12A	P0CX53	165 aa	Known RBP	2.61	□□□□□ -1.99
NBP1	YLR457C	RPL12B	P0CX54	165 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	PUT4	P15380	627 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
NBP1	YLR457C	TOA2	P32774	122 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	FMT1	P32785	401 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	SPO23	P33757	523 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	QDR3	P38227	689 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	WSS1	P38838	269 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	YER184C	P39961	794 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	HEM14	P40012	539 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	PFS2	P42841	465 aa	Known RBP	2.61	□□□□□ -1.99
NBP1	YLR457C	AIP1	P46680	615 aa	Known RBP	2.61	□□□□□ -1.99
NBP1	YLR457C	SEH1	P53011	349 aa	Known RBP	2.61	□□□□□ -1.99
NBP1	YLR457C	YGR111W	P53265	400 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	YPL107W	Q02873	248 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	NSE1	Q07913	336 aa		2.61	□□□□□ -1.99
NBP1	YLR457C	PCL9	Q12477	304 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms